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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, golgi

Predictor Summary:
  • nucleus 1
  • golgi 1
  • mitochondrion 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, peroxisome
Any Predictor:golgi, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 87.01 90.11
CDX96589 Canola golgi, peroxisome, plasma membrane 87.01 89.97
Os05t0426400-01 Rice mitochondrion 41.63 74.3
VIT_18s0001g15580.t01 Wine grape golgi, mitochondrion, peroxisome, plastid 73.87 73.52
KRH72868 Soybean golgi 74.02 73.45
HORVU0Hr1G000670.2 Barley cytosol 45.54 73.12
KRH15962 Soybean golgi 66.82 72.25
PGSC0003DMT400063796 Potato golgi 70.27 69.29
CDY38364 Canola extracellular, golgi 59.94 69.01
Solyc04g064790.2.1 Tomato golgi 69.95 68.98
CDY13574 Canola plastid 47.1 65.01
Os01t0880200-01 Rice cytosol, golgi, peroxisome 61.82 62.2
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 98.28 60.68
EES01856 Sorghum golgi 60.09 60.66
EES19558 Sorghum golgi 59.78 60.54
GSMUA_Achr3P16530_001 Banana plastid 55.09 60.48
HORVU1Hr1G065560.2 Barley golgi 59.31 60.35
TraesCS1A01G266600.2 Wheat cytosol, golgi, peroxisome 59.47 60.22
TraesCS1D01G266700.2 Wheat cytosol, golgi, peroxisome 59.31 60.16
Zm00001d038229_P001 Maize plasma membrane 59.47 60.13
TraesCS1B01G277500.1 Wheat cytosol, golgi, peroxisome 59.15 60.0
HORVU0Hr1G000650.2 Barley golgi 59.15 59.9
TraesCS3A01G409200.2 Wheat golgi 59.31 59.78
TraesCS3D01G404100.1 Wheat golgi 59.31 59.78
HORVU3Hr1G091400.3 Barley golgi 59.15 59.72
TraesCS3B01G442700.1 Wheat golgi 59.0 59.46
Zm00001d042627_P005 Maize golgi 59.31 59.4
Bra017919.1-P Field mustard cytosol 95.46 59.17
CDY18535 Canola plastid 61.03 59.09
Zm00001d012224_P001 Maize golgi 58.84 58.66
CDY53768 Canola plastid 60.41 58.48
CDX92257 Canola plastid 57.12 58.03
GSMUA_Achr6P18570_001 Banana plastid 47.26 57.52
GSMUA_Achr8P29450_001 Banana plasma membrane 54.62 56.29
GSMUA_Achr7P23420_001 Banana cytosol, plastid 45.7 55.83
GSMUA_Achr4P16410_001 Banana endoplasmic reticulum, golgi 48.04 54.53
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plastid 49.45 54.48
GSMUA_Achr8P32660_001 Banana plastid 56.34 52.79
GSMUA_Achr7P03050_001 Banana endoplasmic reticulum 47.42 52.33
GSMUA_Achr10P... Banana golgi 44.6 52.2
CDX99330 Canola cytosol 10.64 47.22
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 38.34 41.39
CDX68968 Canola golgi 38.81 40.92
CDX75345 Canola golgi, plastid 38.5 40.8
CDY32144 Canola endoplasmic reticulum, golgi 34.59 39.46
CDX95254 Canola golgi 34.27 39.32
CDY41730 Canola endoplasmic reticulum, golgi 34.12 39.14
CDY32143 Canola golgi 34.27 38.56
CDY31118 Canola golgi 34.27 38.56
CDY22652 Canola golgi 33.96 38.27
CDY06343 Canola golgi 31.92 37.16
CDY28291 Canola nucleus 10.95 30.3
CDY28292 Canola golgi 29.26 25.3
CDY58112 Canola plasma membrane 15.96 19.25
CDY02625 Canola plasma membrane 15.49 18.57
CDX88935 Canola plasma membrane 15.34 18.35
CDX70822 Canola plasma membrane 15.18 18.23
CDY29996 Canola extracellular, plasma membrane 15.02 17.58
CDY21129 Canola extracellular, golgi, plasma membrane 14.71 17.22
CDY40445 Canola plasma membrane 10.95 14.17
CDX84174 Canola plasma membrane 10.95 14.17
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 9.23 13.82
CDY32093 Canola cytosol 9.23 13.72
CDY40528 Canola plasma membrane 8.45 9.73
Protein Annotations
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-MapMan:21.2.2.1.2.1Gene3D:3.90.550.10GO:A0A078EYD4
EnsemblPlants:CDY04633ProteinID:CDY04633ProteinID:CDY04633.1GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016757EnsemblPlantsGene:GSBRNA2T00119217001InterPro:Glyco_trans_8InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPFAM:PF01501
PANTHER:PTHR11183PANTHER:PTHR11183:SF56SUPFAM:SSF53448UniParc:UPI0004EB1E73::
Description
BnaC05g16710D
Coordinates
chrLK031956:-:510285..512885
Molecular Weight (calculated)
73804.0 Da
IEP (calculated)
7.140
GRAVY (calculated)
-0.413
Length
639 amino acids
Sequence
(BLAST)
001: MRLPSPSPVE PRHRLSSQTD ETSKRRSLRN RDAKDLDKGG LHGSFQYRNW TGKFSTLKVV LILIVLGTVY TLYRSPAVHI ADHPSNNNSR WMMESSALDP
101: RYVSSAEINW DHMSDVVEKL TGKSGYQGVG FINLNDDEIA QWKDLIPDCD HVALHLGHMK SNITWESLYP EWIDEEEQFE VPTCPSLPWI QVPGKPRLDL
201: VVVKLPCNKA GKWSRDVVRL HLQLAAARVA ASSKGLHDVH VLFITDCFPI PNLFIGKELV SRQGNLWLFK PNLHQLRQKV QLPIGSCELT VPLKAKDTFY
301: SASAKREAYA TILHSANFYV CGAITAAQSI RMAGSTRDLV ILVDDSITEH HRSGLAAAGW KIYSIQRIRN PKAEAEAYNE WNYSKFRLWQ LTEYDKIIFI
401: DADMLILRNI DFLFEMPEIS ATGNNATLFN SGVMVVEPSN STFQLLMDHI NEIVSYNGGD QGYLNEVYTW WHRIPKHMNF LKHFWEGDEP EIKQMKTRLF
501: GTDPPILYVL HYLGNKPWLC FRDYDCNWNV DILQEFASDV AHKTWWRVHD AMPENLQKFC LLRSKQKAQL EWDRMQAEKG NYTDGHWKIK IKDKRLETCY
601: EDFCYWESML WHWGDKNWTD NSTNSLSPPP ALKTPLSSL
Best Arabidopsis Sequence Match ( AT1G77130.1 )
(BLAST)
001: MIPSSSPMES RHRLSFSNEK TSRRRFQRIE KGVKFNTLKL VLICIMLGAL FTIYRFRYPP LQIPEIPTSF GLTTDPRYVA TAEINWNHMS NLVEKHVFGR
101: SEYQGIGLIN LNDNEIDRFK EVTKSDCDHV ALHLDYAAKN ITWESLYPEW IDEVEEFEVP TCPSLPLIQI PGKPRIDLVI AKLPCDKSGK WSRDVARLHL
201: QLAAARVAAS SKGLHNVHVI LVSDCFPIPN LFTGQELVAR QGNIWLYKPN LHQLRQKLQL PVGSCELSVP LQAKDNFYSA GAKKEAYATI LHSAQFYVCG
301: AIAAAQSIRM SGSTRDLVIL VDETISEYHK SGLVAAGWKI QMFQRIRNPN AVPNAYNEWN YSKFRLWQLT EYSKIIFIDA DMLILRNIDF LFEFPEISAT
401: GNNATLFNSG LMVVEPSNST FQLLMDNINE VVSYNGGDQG YLNEIFTWWH RIPKHMNFLK HFWEGDEPEI KKMKTSLFGA DPPILYVLHY LGYNKPWLCF
501: RDYDCNWNVD IFQEFASDEA HKTWWRVHDA MPENLHKFCL LRSKQKAQLE WDRRQAEKGN YKDGHWKIKI KDKRLKTCFE DFCFWESMLW HWGETNSTNN
601: SSTTTTSSPP HKTALPSL
Arabidopsis Description
GUX3Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WC33]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.