Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005312.1-P | Field mustard | plasma membrane | 99.39 | 99.39 |
| CDY32093 | Canola | cytosol | 81.98 | 94.19 |
| CDY40445 | Canola | plasma membrane | 92.92 | 92.92 |
| AT2G35710.1 | Thale cress | plasma membrane | 92.11 | 91.55 |
| CDY32275 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 68.83 | 79.63 |
| GSMUA_Achr11P... | Banana | cytosol | 61.34 | 70.3 |
| GSMUA_Achr8P11090_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 61.34 | 70.3 |
| VIT_00s2563g00010.t01 | Wine grape | cytosol, plasma membrane | 54.25 | 70.16 |
| OQU82100 | Sorghum | plasma membrane | 60.53 | 69.86 |
| GSMUA_Achr5P20900_001 | Banana | plasma membrane | 60.53 | 69.37 |
| GSMUA_Achr5P13360_001 | Banana | cytosol | 60.32 | 69.14 |
| GSMUA_Achr5P15460_001 | Banana | cytosol | 60.12 | 68.91 |
| GSMUA_Achr1P01490_001 | Banana | cytosol | 59.31 | 67.98 |
| Solyc08g078650.2.1 | Tomato | plasma membrane | 64.37 | 67.8 |
| KRH28078 | Soybean | plasma membrane | 64.57 | 67.58 |
| KRH77365 | Soybean | cytosol, peroxisome | 45.14 | 67.58 |
| HORVU2Hr1G097240.1 | Barley | cytosol, mitochondrion, plasma membrane | 60.32 | 67.57 |
| PGSC0003DMT400012126 | Potato | plasma membrane | 64.98 | 67.44 |
| Os04t0553800-01 | Rice | cytosol, mitochondrion, plastid | 60.32 | 66.97 |
| TraesCS2B01G430800.1 | Wheat | plasma membrane | 62.15 | 65.32 |
| Zm00001d002725_P001 | Maize | plasma membrane | 61.94 | 65.25 |
| KRH57402 | Soybean | extracellular, golgi, plasma membrane | 62.96 | 65.2 |
| KRH04125 | Soybean | plasma membrane | 62.55 | 64.92 |
| TraesCS2D01G409400.1 | Wheat | plasma membrane | 61.94 | 64.69 |
| TraesCS2A01G412200.1 | Wheat | plasma membrane | 61.54 | 64.54 |
| HORVU1Hr1G054100.7 | Barley | mitochondrion | 54.86 | 60.36 |
| OQU92160 | Sorghum | golgi, mitochondrion | 57.09 | 58.02 |
| Zm00001d047104_P001 | Maize | golgi, mitochondrion | 56.88 | 57.58 |
| Zm00001d026165_P003 | Maize | plasma membrane | 55.26 | 57.11 |
| TraesCS1D01G214700.1 | Wheat | golgi | 55.47 | 56.15 |
| TraesCS1A01G211500.1 | Wheat | golgi, plasma membrane | 55.67 | 56.01 |
| Zm00001d029920_P001 | Maize | mitochondrion | 57.29 | 55.71 |
| Os10t0555100-01 | Rice | golgi, plasma membrane | 55.06 | 55.28 |
| CDY40528 | Canola | plasma membrane | 60.53 | 53.87 |
| TraesCS1B01G225300.1 | Wheat | golgi | 54.86 | 52.32 |
| CDX88935 | Canola | plasma membrane | 20.04 | 18.54 |
| CDX70822 | Canola | plasma membrane | 19.84 | 18.42 |
| CDY58112 | Canola | plasma membrane | 19.64 | 18.3 |
| CDY02625 | Canola | plasma membrane | 19.64 | 18.2 |
| CDY29996 | Canola | extracellular, plasma membrane | 19.03 | 17.22 |
| CDY21129 | Canola | extracellular, golgi, plasma membrane | 18.83 | 17.03 |
| CDY45037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 14.57 | 12.16 |
| CDY32144 | Canola | endoplasmic reticulum, golgi | 13.77 | 12.14 |
| CDX75345 | Canola | golgi, plastid | 14.78 | 12.11 |
| CDY38364 | Canola | extracellular, golgi | 13.56 | 12.07 |
| CDY06343 | Canola | golgi | 13.36 | 12.02 |
| CDX68968 | Canola | golgi | 14.37 | 11.72 |
| CDY41730 | Canola | endoplasmic reticulum, golgi | 13.16 | 11.67 |
| CDY22652 | Canola | golgi | 13.36 | 11.64 |
| CDX95254 | Canola | golgi | 12.96 | 11.49 |
| CDY31118 | Canola | golgi | 13.16 | 11.44 |
| CDY32143 | Canola | golgi | 13.16 | 11.44 |
| CDY18535 | Canola | plastid | 15.18 | 11.36 |
| CDY53768 | Canola | plastid | 15.18 | 11.36 |
| CDY13574 | Canola | plastid | 10.32 | 11.02 |
| CDY04633 | Canola | golgi, mitochondrion, peroxisome | 14.17 | 10.95 |
| CDX92257 | Canola | plastid | 13.56 | 10.65 |
| CDY28291 | Canola | nucleus | 4.66 | 9.96 |
| CDX96589 | Canola | golgi, peroxisome, plasma membrane | 12.15 | 9.71 |
| CDY38807 | Canola | endoplasmic reticulum, golgi, peroxisome | 11.74 | 9.4 |
| CDY28292 | Canola | golgi | 12.55 | 8.39 |
| CDY50243 | Canola | cytosol, peroxisome, plastid, vacuole | 14.57 | 6.96 |
| CDX99330 | Canola | cytosol | 1.62 | 5.56 |
Protein Annotations
| EnsemblPlants:CDX84174 | EnsemblPlantsGene:GSBRNA2T00141214001 | Gene3D:3.90.550.10 | GO:A0A078D716 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans |
| PANTHER:PTHR11183 | PANTHER:PTHR11183:SF93 | ProteinID:CDX84174 | ProteinID:CDX84174.1 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI0004EE2A73 | MapMan:35.1 | : | : |
Description
BnaC04g09360D
Coordinates
chrLK031836:+:488084..492611
Molecular Weight (calculated)
56423.1 Da
IEP (calculated)
8.574
GRAVY (calculated)
0.255
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLQRGLMLL CCVLTVLVIE TTAYRERQLL QPQETAIDTE NALVAVQDRG LKTRRPEHKN AYATMMYMGT PRDYEFYVAT RVLIRSLRSL HVDADLVVIA
101: SLDVPLRWVQ TLEAEDGAKV VRVENLDNPY RKQTNFNSRF KLTLNKLYAW ALSDYDRVVM LDADTLFLKK TDELFQCGRF CAVFINPCIF HTGLFVLQPS
201: VEVFKDMVHE LQVGRENRDG ADQGFLVSYF SDLLDQPLFR PPSNGSVLSG HLRLPLGYQM DASYFYLKLR WNIPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHEQR RATLGYSAEM PLAIIQAVFY LGIIVVTRLA RPTITKLCYR RSDRNLTTIQ AGFKFIALLS VVAAYVFPFF TIPHTIHPLI GWFLYLMASF
401: ALSSIPINTL LLPTLPVLTP WFGIFGTLLV MAFPWYPDGV VRALSVFGYA FCCAPFVWVA FLKITSHLQV LIEKEVLFPR LGDSGTTSGF SKLY
101: SLDVPLRWVQ TLEAEDGAKV VRVENLDNPY RKQTNFNSRF KLTLNKLYAW ALSDYDRVVM LDADTLFLKK TDELFQCGRF CAVFINPCIF HTGLFVLQPS
201: VEVFKDMVHE LQVGRENRDG ADQGFLVSYF SDLLDQPLFR PPSNGSVLSG HLRLPLGYQM DASYFYLKLR WNIPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHEQR RATLGYSAEM PLAIIQAVFY LGIIVVTRLA RPTITKLCYR RSDRNLTTIQ AGFKFIALLS VVAAYVFPFF TIPHTIHPLI GWFLYLMASF
401: ALSSIPINTL LLPTLPVLTP WFGIFGTLLV MAFPWYPDGV VRALSVFGYA FCCAPFVWVA FLKITSHLQV LIEKEVLFPR LGDSGTTSGF SKLY
001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY
Arabidopsis Description
PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.