CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

nucleus 1
mitochondrion 1
extracellular 4
plasma membrane 5
endoplasmic reticulum 3
vacuole 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04125	Soybean	plasma membrane	96.23	96.43
KRH77365	Soybean	cytosol, peroxisome	60.59	87.58
KRH28078	Soybean	plasma membrane	81.97	82.84
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	68.13	75.41
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	59.96	74.87
GSMUA_Achr11P...	Banana	cytosol	67.51	74.71
GSMUA_Achr5P20900_001	Banana	plasma membrane	66.67	73.78
OQU82100	Sorghum	plasma membrane	65.2	72.66
GSMUA_Achr1P01490_001	Banana	cytosol	64.15	71.0
GSMUA_Achr5P13360_001	Banana	cytosol	64.15	71.0
Solyc08g078650.2.1	Tomato	plasma membrane	69.6	70.79
PGSC0003DMT400012126	Potato	plasma membrane	70.44	70.59
GSMUA_Achr5P15460_001	Banana	cytosol	63.73	70.53
Os04t0553800-01	Rice	cytosol, mitochondrion, plastid	65.41	70.11
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	62.68	70.02
HORVU2Hr1G097240.1	Barley	cytosol, mitochondrion, plasma membrane	64.36	69.61
CDY32093	Canola	cytosol	62.68	69.53
Zm00001d002725_P001	Maize	plasma membrane	66.25	67.38
TraesCS2B01G430800.1	Wheat	plasma membrane	66.25	67.23
TraesCS2A01G412200.1	Wheat	plasma membrane	66.04	66.88
TraesCS2D01G409400.1	Wheat	plasma membrane	66.25	66.81
HORVU1Hr1G054100.7	Barley	mitochondrion	59.96	63.7
AT4G16600.1	Thale cress	plasma membrane	65.62	63.36
Bra005312.1-P	Field mustard	plasma membrane	65.41	63.16
CDX84174	Canola	plasma membrane	65.2	62.96
Bra017301.1-P	Field mustard	plasma membrane	64.99	62.75
Bra038490.1-P	Field mustard	plasma membrane	64.15	62.7
CDY40445	Canola	plasma membrane	64.78	62.55
AT2G35710.1	Thale cress	plasma membrane	64.36	61.77
OQU92160	Sorghum	golgi, mitochondrion	62.47	61.32
Zm00001d047104_P001	Maize	golgi, mitochondrion	62.47	61.07
TraesCS1D01G214700.1	Wheat	golgi	60.8	59.43
Zm00001d026165_P003	Maize	plasma membrane	59.33	59.2
Zm00001d029920_P001	Maize	mitochondrion	62.89	59.06
Os10t0555100-01	Rice	golgi, plasma membrane	60.59	58.74
TraesCS1A01G211500.1	Wheat	golgi, plasma membrane	60.38	58.66
TraesCS1B01G225300.1	Wheat	golgi	60.17	55.41
CDY40528	Canola	plasma membrane	55.56	47.75
KRG92718	Soybean	endoplasmic reticulum	20.96	18.48
KRH68773	Soybean	endoplasmic reticulum	20.75	17.97
KRG97021	Soybean	endoplasmic reticulum	20.55	17.79
KRH34122	Soybean	plasma membrane	16.98	15.7
KRH68559	Soybean	cytosol	10.27	13.8
KRH33949	Soybean	plastid	15.3	12.74
KRG96838	Soybean	golgi	14.26	12.3
KRH15352	Soybean	golgi	14.68	11.78
KRH05688	Soybean	golgi	14.47	11.66
KRH15962	Soybean	golgi	14.26	11.51
KRH57436	Soybean	cytosol	14.26	11.45
KRH59555	Soybean	cytosol	15.3	11.41
KRH53878	Soybean	cytosol, golgi, mitochondrion	15.09	11.27
KRH64070	Soybean	plastid	15.09	11.27
KRH72868	Soybean	golgi	15.09	11.18
KRH61283	Soybean	golgi	13.63	10.92
KRH43404	Soybean	cytosol	1.26	2.14

Protein Annotations

EMBL:ACUP02002832	EnsemblPlants:KRH57402	EnsemblPlantsGene:GLYMA_05G059300	EntrezGene:100794824	Gene3D:3.90.550.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF93
ProteinID:KRH57402	ProteinID:KRH57402.1	SEG:seg	SignalP:SignalP-TM	SUPFAM:SSF53448	TMHMM:TMhelix
UniParc:UPI0001CABE81	UniProt:I1K0Q0	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:5529422..5537523

Molecular Weight (calculated)

54256.6 Da

IEP (calculated)

8.742

GRAVY (calculated)

0.217

Length

477 amino acids

Sequence
(BLAST)

001: MAWAKKPGDS NNVGFMRWLA LVLVLVLLSG FWCVSGVKEG KRNAYATMMY VGTPRDYEFY IAIRVLLKSL ATLDAQADLV VIASLDVPPR WIRALEKEDG
101: AKVVRVENLD NPYKHQDNFD KRFKLSLNKL YAWSLVDYDR VVMLDADNLF LQNTDELFQC GQFCAVFINP CVFHTGLFVL QPSMTVFKDM VHELRNGREN
201: PDGADQGFIA SYFPELLDKP MFHPPPNGTK LDGTYRLPLG YQMDASYYYL KLRWSIPCGP NSVITFPGAP WLKPWYWWSW PVLPLGLQWH DKRRQTLGYG
301: AEMAVILIQS AIYLGIIAMT RFARPSLSKL CYRRSDKSIN LVQNILKLVA LWSILAAYTT PFFIIPHTVH PLLGWPLYLL GVFALCSIAV NAFLLPMLPV
401: LMPWLGITGA LIVMAFPWYS DGVVRALCVF GYAFCAAPCV WASMTRIMAG LHQSLEREAF LPRLGESSPP SWFNKLY

Best Arabidopsis Sequence Match ( AT4G16600.1 )
(BLAST)

001: MDLQRTLMFS CWVLSLLIIK TTAYNEKQLF QPLETENANA MTAVMERGLK TQRRPEHKNA YATMMYMGTP RDYEFYVATR VLIRSLKSLH VDADIVVIAS
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY

Arabidopsis Description

PGSIP7Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.