Factsheet for TraesCS1A01G211500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G054100.7	Barley	mitochondrion	88.8	97.1
TraesCS1D01G214700.1	Wheat	golgi	95.93	96.52
TraesCS1B01G225300.1	Wheat	golgi	94.7	89.77
OQU92160	Sorghum	golgi, mitochondrion	83.3	84.16
Zm00001d047104_P001	Maize	golgi, mitochondrion	81.87	82.38
Os10t0555100-01	Rice	golgi, plasma membrane	80.65	80.49
Zm00001d029920_P001	Maize	mitochondrion	82.08	79.33
GSMUA_Achr8P11090_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	62.53	71.23
GSMUA_Achr11P...	Banana	cytosol	61.1	69.61
GSMUA_Achr5P20900_001	Banana	plasma membrane	61.1	69.61
GSMUA_Achr5P15460_001	Banana	cytosol	59.88	68.21
GSMUA_Achr5P13360_001	Banana	cytosol	58.86	67.05
GSMUA_Achr1P01490_001	Banana	cytosol	57.84	65.89
VIT_00s2563g00010.t01	Wine grape	cytosol, plasma membrane	50.92	65.44
KRH77365	Soybean	cytosol, peroxisome	43.79	65.15
TraesCS2A01G412200.1	Wheat	plasma membrane	62.12	64.76
Solyc06g060710.2.1	Tomato	cytosol	49.49	63.12
CDY32275	Canola	cytosol, mitochondrion, peroxisome, plasma membrane	54.18	62.3
KRH28078	Soybean	plasma membrane	59.47	61.86
CDY32093	Canola	cytosol	53.97	61.63
Solyc08g078650.2.1	Tomato	plasma membrane	58.86	61.62
PGSC0003DMT400012126	Potato	plasma membrane	59.27	61.13
PGSC0003DMT400030982	Potato	plasma membrane	57.84	61.08
KRH57402	Soybean	extracellular, golgi, plasma membrane	58.66	60.38
KRH04125	Soybean	plasma membrane	57.84	59.66
AT4G16600.1	Thale cress	plasma membrane	58.45	58.1
Bra017301.1-P	Field mustard	plasma membrane	56.62	56.28
Bra038490.1-P	Field mustard	plasma membrane	55.8	56.15
AT2G35710.1	Thale cress	plasma membrane	56.82	56.14
Bra005312.1-P	Field mustard	plasma membrane	56.21	55.87
CDY40445	Canola	plasma membrane	56.01	55.67
CDX84174	Canola	plasma membrane	56.01	55.67
CDY40528	Canola	plasma membrane	47.66	42.16
TraesCS6A01G223900.1	Wheat	plasma membrane	18.53	16.82
TraesCS2A01G381700.1	Wheat	plasma membrane	17.72	16.08
TraesCS4A01G004100.1	Wheat	golgi	14.87	12.33
TraesCS1A01G266600.2	Wheat	cytosol, golgi, peroxisome	15.27	11.89
TraesCS3A01G381300.1	Wheat	golgi	14.46	11.79
TraesCS3A01G409200.2	Wheat	golgi	14.46	11.2
TraesCS5A01G067100.1	Wheat	golgi	13.03	9.94

Protein Annotations

EnsemblPlants:TraesCS1A01G211500.1	EnsemblPlantsGene:TraesCS1A01G211500	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183
PANTHER:PTHR11183:SF60	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53448	TIGR:cd02537	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:374213945..374217469

Molecular Weight (calculated)

55705.3 Da

IEP (calculated)

8.359

GRAVY (calculated)

0.174

Length

491 amino acids

Sequence
(BLAST)

001: MGRRPAASRR LAAAVAVAIL LLVVASATAG AAEERGRRGV AVRQGEGRGR HHHRHAYAAM MYMGTPRDYE FYVAVRVMMR SLSRVGADAD RVLIASSDVP
101: RDWVRAMREE DGMRVVVVEN LKNPYEGNLG GMNRRFKLTL NKLYAWSLVD YERVVMIDSD NIFLQNTDEL FQCGQFCAVF INPCYFHTGL FVLQPSMDVF
201: NGMLHDLEIG RDNSDGADQG FLVGCYPDLL DKPLFHPPEN GTKLNGTYRL PLGYQMDASY YYLKLHWHVP CGPNSVITFP SAPWFKPWYW WSWPILPLGL
301: SWHKQRWDDL GYAAEIPVVL MELLMYITII AVTRLARPQM TKLCYNRRPE KQGALLQWLI KLAGIVAMVA AYAIPFFVIP CTVHPIMGWS MYLFGVLAFS
401: TVVINAFLLP PLAVLTAWLG IVGMLFVMAF PWYHDGIARI LVVVAYAFCS APFLWASIVR VMDSLQTMLE RDPHFPRLGD PAPETEFSKL Y

Best Arabidopsis Sequence Match ( AT4G16600.1 )
(BLAST)

001: MDLQRTLMFS CWVLSLLIIK TTAYNEKQLF QPLETENANA MTAVMERGLK TQRRPEHKNA YATMMYMGTP RDYEFYVATR VLIRSLKSLH VDADIVVIAS
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY

Arabidopsis Description

PGSIP7Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6K0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.