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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40445 Canola plasma membrane 97.91 85.22
CDX84174 Canola plasma membrane 94.19 81.98
AT2G35710.1 Thale cress plasma membrane 93.49 80.89
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 78.37 78.92
VIT_00s2563g00010.t01 Wine grape cytosol, plasma membrane 63.02 70.94
GSMUA_Achr8P11090_001 Banana cytosol, mitochondrion, plasma membrane, plastid 70.0 69.84
GSMUA_Achr11P... Banana cytosol 69.3 69.14
GSMUA_Achr5P20900_001 Banana plasma membrane 68.84 68.68
GSMUA_Achr5P15460_001 Banana cytosol 68.6 68.45
GSMUA_Achr5P13360_001 Banana cytosol 68.37 68.21
OQU82100 Sorghum plasma membrane 67.67 67.99
KRH77365 Soybean cytosol, peroxisome 51.86 67.58
GSMUA_Achr1P01490_001 Banana cytosol 67.21 67.05
HORVU2Hr1G097240.1 Barley cytosol, mitochondrion, plasma membrane 67.21 65.53
Os04t0553800-01 Rice cytosol, mitochondrion, plastid 67.44 65.17
Solyc08g078650.2.1 Tomato plasma membrane 70.7 64.82
PGSC0003DMT400012126 Potato plasma membrane 71.4 64.5
KRH28078 Soybean plasma membrane 70.7 64.41
KRH57402 Soybean extracellular, golgi, plasma membrane 69.53 62.68
KRH04125 Soybean plasma membrane 69.3 62.6
TraesCS2B01G430800.1 Wheat plasma membrane 68.14 62.34
Zm00001d002725_P001 Maize plasma membrane 67.67 62.05
TraesCS2A01G412200.1 Wheat plasma membrane 67.67 61.78
TraesCS2D01G409400.1 Wheat plasma membrane 67.91 61.73
HORVU1Hr1G054100.7 Barley mitochondrion 61.63 59.02
OQU92160 Sorghum golgi, mitochondrion 62.79 55.56
Zm00001d047104_P001 Maize golgi, mitochondrion 62.79 55.33
TraesCS1D01G214700.1 Wheat golgi 61.63 54.3
Zm00001d026165_P003 Maize plasma membrane 60.0 53.97
TraesCS1A01G211500.1 Wheat golgi, plasma membrane 61.63 53.97
CDY40528 Canola plasma membrane 69.53 53.87
Os10t0555100-01 Rice golgi, plasma membrane 61.16 53.46
Zm00001d029920_P001 Maize mitochondrion 62.56 52.95
TraesCS1B01G225300.1 Wheat golgi 60.93 50.58
CDX88935 Canola plasma membrane 20.93 16.85
CDX70822 Canola plasma membrane 20.7 16.73
CDY58112 Canola plasma membrane 20.47 16.6
CDY02625 Canola plasma membrane 20.47 16.51
CDY29996 Canola extracellular, plasma membrane 20.47 16.12
CDY21129 Canola extracellular, golgi, plasma membrane 20.23 15.93
CDY38364 Canola extracellular, golgi 13.95 10.81
CDY06343 Canola golgi 13.72 10.75
CDY32144 Canola endoplasmic reticulum, golgi 13.72 10.54
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 14.42 10.47
CDX75345 Canola golgi, plastid 14.42 10.28
CDX95254 Canola golgi 13.26 10.23
CDY41730 Canola endoplasmic reticulum, golgi 13.26 10.23
CDY22652 Canola golgi 13.49 10.23
CDY32143 Canola golgi 13.49 10.21
CDY31118 Canola golgi 13.49 10.21
CDX68968 Canola golgi 14.19 10.07
CDY13574 Canola plastid 10.47 9.72
CDY53768 Canola plastid 14.65 9.55
CDY18535 Canola plastid 14.65 9.55
CDY04633 Canola golgi, mitochondrion, peroxisome 13.72 9.23
CDY28291 Canola nucleus 4.88 9.09
CDX92257 Canola plastid 13.26 9.06
CDX96589 Canola golgi, peroxisome, plasma membrane 11.63 8.09
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 11.16 7.78
CDY28292 Canola golgi 12.79 7.44
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 14.42 5.99
CDX99330 Canola cytosol 0.93 2.78
Protein Annotations
KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-
KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-Gene3D:3.90.550.10MapMan:35.1GO:A0A078H5K3
UniProt:A0A078H5K3InterPro:Alpha_mannosyltransferaseEnsemblPlants:CDY32093ProteinID:CDY32093ProteinID:CDY32093.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005975GO:GO:0006464GO:GO:0006486GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016757GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00051445001InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPFAM:PF11051
PANTHER:PTHR11183PANTHER:PTHR11183:SF93SUPFAM:SSF53448TMHMM:TMhelixUniPathway:UPA00378UniParc:UPI0004EF4727
SEG:seg:::::
Description
BnaC04g44730DBnaC04g44730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5K3]
Coordinates
chrLK032287:+:250437..253625
Molecular Weight (calculated)
49111.3 Da
IEP (calculated)
8.252
GRAVY (calculated)
0.312
Length
430 amino acids
Sequence
(BLAST)
001: MMYMGTPRDY EFYVATRVLI RSLRDLNVEA DLVVIASLDV PLRWVETLEE DDGAKVVRVK NVDNPYRRQT NFNSRFKLTL NKLYAWALSD YDRVVMLDAD
101: NLFLKKTDEL FQCGPFCAVF INPCIFHTGL FVLQPSLEVF KDMLHELHVG RENRDGADQG FLVSYFSDLL DQPLFRPPSN GSVLSGHLRL PLGYQMDASY
201: FYLKLRWNIP CGPNSVITFP GAVWLKPWYW WSWPVLPLGL SWHEQRRTTV GYSAEMPLAI IQTMFYLGII VVTRLARPNI TKLCYRRSDG NLTTIQAGFK
301: FIALLSVVAA YVFPFFTIPH TIHPLIGWSL YLMASFALSS IPINTLLLPT LPVLTPWIGI LGTLLVMAFP WYPDGVVRAL SVFGYAFCCA PFVWVAFLKI
401: TLHLQVLIEK EVLFPRLGDS GITSGFSKLY
Best Arabidopsis Sequence Match ( AT2G35710.1 )
(BLAST)
001: MDLQRGFVFL SLVLSFMIIE TTAYRERQLL LLQPPQETAI DTANAVVTVQ DRGLKTRRPE HKNAYATMMY MGTPRDYEFY VATRVLIRSL RSLHVEADLV
101: VIASLDVPLR WVQTLEEEDG AKVVRVENVD NPYRRQTNFN SRFKLTLNKL YAWALSDYDR VVMLDADNLF LKKADELFQC GRFCAVFINP CIFHTGLFVL
201: QPSVEVFKDM LHELQVGRKN PDGADQGFLV SYFSDLLDQP LFSPPSNGSV LNGHLRLPLG YQMDASYFYL KLRWNIPCGP NSVITFPGAV WLKPWYWWSW
301: PVLPLGFSWH EQRRATIGYS AEMPLVIIQA MFYLGIIVVT RLARPNITKL CYRRSDRNLT TIQAGFKLIA LLSVVAAYIF PFFTIPHTIH PLIGWSLYLM
401: ASFALSSISI NTLLLPTLPV LTPWLGILGT LLVMAFPWYP DGVVRALSVF AYAFCCAPFV WVSFRKITSH LQVLIEKEVL FPRLGDSGVT SGFSKLY
Arabidopsis Description
PGSIP8Putative glucuronosyltransferase PGSIP8 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZP6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.