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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58112 Canola plasma membrane 94.75 95.28
Bra023678.1-P Field mustard plasma membrane 94.93 94.93
CDX70822 Canola plasma membrane 88.18 88.35
CDX88935 Canola plasma membrane 87.99 87.83
AT5G18480.1 Thale cress golgi 84.99 84.36
CDY29996 Canola extracellular, plasma membrane 78.24 76.37
CDY21129 Canola extracellular, golgi, plasma membrane 78.05 76.19
Solyc04g009920.2.1 Tomato golgi 63.79 63.79
KRG92718 Soybean endoplasmic reticulum 64.73 63.77
KRG97021 Soybean endoplasmic reticulum 65.85 63.7
VIT_14s0036g00430.t01 Wine grape golgi 64.92 63.37
PGSC0003DMT400029873 Potato plasma membrane 63.23 63.23
KRH68773 Soybean endoplasmic reticulum 65.29 63.16
Solyc05g055040.2.1 Tomato plasma membrane 63.04 63.04
PGSC0003DMT400060425 Potato plasma membrane 62.29 62.29
GSMUA_Achr11P... Banana plasma membrane 60.6 60.15
GSMUA_Achr5P18580_001 Banana plasma membrane 60.98 59.41
KRH34122 Soybean plasma membrane 56.85 58.72
EES11117 Sorghum plasma membrane 57.41 57.09
Zm00001d025865_P001 Maize plasma membrane 57.22 56.9
HORVU2Hr1G089320.8 Barley cytosol 51.22 56.76
TraesCS2B01G399000.1 Wheat plasma membrane 57.04 56.3
TraesCS2A01G381700.1 Wheat plasma membrane 57.04 56.19
Os02t0624400-01 Rice golgi 57.6 56.12
TraesCS6B01G257400.2 Wheat plasma membrane 50.47 56.04
TraesCS2D01G378200.1 Wheat plasma membrane 56.66 55.93
TraesCS6D01G211500.1 Wheat plasma membrane 56.29 55.45
TraesCS6A01G223900.1 Wheat plasma membrane 55.35 54.53
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 42.78 52.66
Os04t0517400-01 Rice cytosol, plasma membrane 24.77 44.59
CDY32275 Canola cytosol, mitochondrion, peroxisome, plasma membrane 17.45 21.78
CDY32093 Canola cytosol 16.51 20.47
CDX84174 Canola plasma membrane 18.2 19.64
CDY40445 Canola plasma membrane 17.45 18.83
CDY06343 Canola golgi 17.07 16.58
CDX95254 Canola golgi 17.26 16.52
CDY41730 Canola endoplasmic reticulum, golgi 17.07 16.34
CDY22652 Canola golgi 17.26 16.23
CDY32144 Canola endoplasmic reticulum, golgi 16.89 16.07
CDY38364 Canola extracellular, golgi 16.7 16.04
CDY31118 Canola golgi 17.07 16.02
CDY32143 Canola golgi 17.07 16.02
CDY45037 Canola endoplasmic reticulum, golgi, plasma membrane 17.45 15.71
CDY40528 Canola plasma membrane 16.14 15.5
CDY04633 Canola golgi, mitochondrion, peroxisome 18.57 15.49
CDX75345 Canola golgi, plastid 17.26 15.26
CDX68968 Canola golgi 16.89 14.85
CDY18535 Canola plastid 18.2 14.7
CDY53768 Canola plastid 18.2 14.7
CDX96589 Canola golgi, peroxisome, plasma membrane 16.51 14.24
CDY38807 Canola endoplasmic reticulum, golgi, peroxisome 16.32 14.1
CDY13574 Canola plastid 11.63 13.39
CDX92257 Canola plastid 15.57 13.2
CDY28291 Canola nucleus 4.88 11.26
CDY28292 Canola golgi 15.2 10.96
CDY50243 Canola cytosol, peroxisome, plastid, vacuole 20.07 10.34
CDX99330 Canola cytosol 1.5 5.56
Protein Annotations
EnsemblPlants:CDY02625EnsemblPlantsGene:GSBRNA2T00114754001Gene3D:3.90.550.10GO:A0A078EKT5GO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_8InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR11183
PANTHER:PTHR11183:SF65PFAM:PF01501ProteinID:CDY02625ProteinID:CDY02625.1SEG:segSignalP:SignalP-noTM
SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EE9A4FMapMan:5.4.13.2::
Description
BnaC02g08100D
Coordinates
chrLK031936:+:489084..491876
Molecular Weight (calculated)
59989.7 Da
IEP (calculated)
9.234
GRAVY (calculated)
0.205
Length
533 amino acids
Sequence
(BLAST)
001: MIIMVRLKTS LRLLLLSIAL LKGSFGSESS KEAYITLLYG DEFLLGVRVL GKSIRDTGSD KDMVALVSDG VSDYSKNLLK ADGWKVEKIS LLANPNQVHP
101: TRFWGVYTKL KIFNMTDYNK VVYLDADTIV VKNIDDLFKC SKFCANLKHS ERLNSGVMVV EPSQALFSDM MRKVKTLSSY TGGDQGFLNS YYPDFPNARV
201: FDPSLTVEEL RTRPVPDMER LSTLYNADVG LYMLANKWMV DESKLHVIHY TLGPLKPWDW WTAWLVKPVD AWHSIRVKLE ETLPGTGGGK NQKDEFVVKL
301: LFLLPLCGVL FCVYRSIQVH EGSLFNQIRY LYYKIRSNGT RGVSTFSTMY PSYQLHGGST RSKVPQHLGA VAVLVCFIAL LISVGTSFVI VPRQIMPWTG
401: LILVYEWTFT IFFLLFGCFL LLVHQHGKKL SVHTESSSLD DSRKGHQRGG VSCDVTILYY GLGMVFLAIA AVSLPYILGI TALFLRLGLM VGVAIILAAF
501: MTYASEQLAV RWFMRGLEDR GEASRSKSLC FMC
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.