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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 5
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:mitochondrion, nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400060425 Potato plasma membrane 97.56 97.56
Solyc04g009920.2.1 Tomato golgi 80.3 80.3
VIT_14s0036g00430.t01 Wine grape golgi 72.61 70.88
KRG92718 Soybean endoplasmic reticulum 68.48 67.47
KRH68773 Soybean endoplasmic reticulum 69.61 67.33
KRG97021 Soybean endoplasmic reticulum 69.04 66.79
GSMUA_Achr5P18580_001 Banana plasma membrane 67.73 66.0
GSMUA_Achr11P... Banana plasma membrane 65.1 64.62
CDX88935 Canola plasma membrane 64.54 64.42
Bra006462.1-P Field mustard plasma membrane 64.54 64.3
CDX70822 Canola plasma membrane 63.98 64.1
AT5G18480.1 Thale cress golgi 64.54 64.06
CDY02625 Canola plasma membrane 63.04 63.04
Bra023678.1-P Field mustard plasma membrane 62.66 62.66
CDY58112 Canola plasma membrane 62.29 62.64
Bra040140.1-P Field mustard extracellular, golgi, plasma membrane 63.79 62.27
CDY29996 Canola extracellular, plasma membrane 63.6 62.09
CDY21129 Canola extracellular, golgi, plasma membrane 63.6 62.09
EES11117 Sorghum plasma membrane 62.1 61.75
KRH34122 Soybean plasma membrane 59.66 61.63
HORVU2Hr1G089320.8 Barley cytosol 55.35 61.33
TraesCS6B01G257400.2 Wheat plasma membrane 55.16 61.25
Zm00001d025865_P001 Maize plasma membrane 61.54 61.19
TraesCS2A01G381700.1 Wheat plasma membrane 61.91 61.0
TraesCS2B01G399000.1 Wheat plasma membrane 61.54 60.74
TraesCS2D01G378200.1 Wheat plasma membrane 61.54 60.74
Os02t0624400-01 Rice golgi 61.35 59.78
TraesCS6D01G211500.1 Wheat plasma membrane 60.41 59.52
TraesCS6A01G223900.1 Wheat plasma membrane 60.23 59.33
HORVU6Hr1G058670.11 Barley endoplasmic reticulum, golgi 47.84 58.89
Os04t0517400-01 Rice cytosol, plasma membrane 28.14 50.68
Solyc08g078650.2.1 Tomato plasma membrane 17.64 20.04
Solyc06g060710.2.1 Tomato cytosol 14.26 19.74
Solyc11g005760.1.1 Tomato cytosol 18.39 17.22
Solyc01g098960.1.1 Tomato golgi 16.7 16.04
Solyc04g078980.2.1 Tomato golgi 16.7 15.78
Solyc04g064790.2.1 Tomato golgi 18.95 15.59
Solyc01g098970.1.1 Tomato golgi 15.76 15.22
Solyc04g078990.2.1 Tomato golgi 16.32 15.1
Protein Annotations
EnsemblPlants:Solyc05g055040.2.1EnsemblPlantsGene:Solyc05g055040.2Gene3D:3.90.550.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_8InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPANTHER:PTHR11183PANTHER:PTHR11183:SF65PFAM:PF01501SEG:segSignalP:SignalP-noTM
SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0002766EA2UniProt:K4C2I1MapMan:5.4.13.2:
Description
Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4C2I1]
Coordinates
chr5:+:64810645..64822856
Molecular Weight (calculated)
60361.8 Da
IEP (calculated)
8.964
GRAVY (calculated)
0.144
Length
533 amino acids
Sequence
(BLAST)
001: MKEIDFRHGF LFFLMFLSSN WVIGAIKSQS TEEAYVTLLY GDEFLLGVRV LGKSIRDTGS TKDMVVLVSD GVSQYANDLL RADGWIVEKI SLLSNPNQVR
101: PKRFWGVYTK LKVFNMTKYK KVVYLDADTI VVKSIEDLFK CGKFCANLKH SERLNSGVMV IEPSDEVFKD MMSKVTTLPS YTGGDQGFLN SYYAGFANAR
201: VYEPNQPLDV LNSRKVPEME RLSTLYNADV GLYMLANKWM VDEKELRVIH YTLGPLKPWD WWTSWLLKPV DVWQNVRVRL QESLPGTGGG KNPRDELLVK
301: FLFLVPLLLM VFSYYKSCLQ TRSLFDHIRQ LYYKIRAGCV LAYSSVPSSS ILSDQQPKVP AFLGGISVCV CFAAVLVSLG LSLVIIPRQV MPWTGLFLMY
401: EWTFTLFFLQ FGSYLYLVYQ WGKAVANRAG QSRANSTSLD HESGKGHQRQ QSCCDIAACY YGLGMAFLAI LAPALPSIFG ITALFLRLGL MVVGGLVLAS
501: FMTYAAEHLS IRSFTRGFEE KDMHRSRSIC FFC
Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)
001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC
Arabidopsis Description
IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.