Factsheet for Solyc04g078990.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020680	Potato	golgi	97.92	97.41
Solyc04g078980.2.1	Tomato	golgi	71.01	72.52
VIT_18s0001g10580.t01	Wine grape	golgi	70.31	68.64
KRH05688	Soybean	golgi	67.19	65.37
KRH15352	Soybean	golgi	67.01	64.98
KRH61283	Soybean	golgi	64.24	62.18
Bra011433.1-P	Field mustard	golgi	62.67	61.19
CDY45037	Canola	endoplasmic reticulum, golgi, plasma membrane	61.81	60.14
Bra034558.1-P	Field mustard	endoplasmic reticulum, golgi, plasma membrane	61.63	59.97
CDX75345	Canola	golgi, plastid	62.33	59.54
CDX68968	Canola	golgi	62.33	59.24
AT4G33330.2	Thale cress	endoplasmic reticulum, golgi, plastid	62.85	57.83
TraesCS4B01G301200.1	Wheat	golgi	52.78	51.26
TraesCS4D01G299500.1	Wheat	golgi	52.78	51.09
TraesCS4A01G004100.1	Wheat	golgi	52.26	50.84
Os03t0184300-02	Rice	golgi	53.82	50.49
Zm00001d027938_P001	Maize	plasma membrane	51.56	50.08
EER95378	Sorghum	golgi, plastid	52.43	49.92
GSMUA_Achr3P01740_001	Banana	endoplasmic reticulum, golgi	47.22	49.82
GSMUA_Achr6P10110_001	Banana	endoplasmic reticulum	44.44	48.76
GSMUA_Achr2P22380_001	Banana	extracellular, golgi, plastid	46.88	45.61
Solyc01g098960.1.1	Tomato	golgi	42.71	44.32
Solyc11g005760.1.1	Tomato	cytosol	43.4	43.94
Solyc01g098970.1.1	Tomato	golgi	40.97	42.75
CDY28292	Canola	golgi	49.13	38.3
CDY28291	Canola	nucleus	15.28	38.1
Solyc04g064790.2.1	Tomato	golgi	42.53	37.81
CDX99330	Canola	cytosol	7.81	31.25
Solyc05g055040.2.1	Tomato	plasma membrane	15.1	16.32
Solyc04g009920.2.1	Tomato	golgi	13.72	14.82
Solyc08g078650.2.1	Tomato	plasma membrane	11.46	14.07
Solyc06g060710.2.1	Tomato	cytosol	9.03	13.51

Protein Annotations

MapMan:21.2.2.1.2.1	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009834	GO:GO:0009987	GO:GO:0015020	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0045492	InterPro:GUX	InterPro:Glyco_trans_8	InterPro:IPR029044
UniProt:K4BUY3	InterPro:Nucleotide-diphossugar_trans	PFAM:PF01501	PANTHER:PTHR11183	PANTHER:PTHR11183:SF44	SUPFAM:SSF53448
EnsemblPlantsGene:Solyc04g078990.2	EnsemblPlants:Solyc04g078990.2.1	TMHMM:TMhelix	UniParc:UPI0002766DFF	:	:

Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4BUY3]

Coordinates

chr4:-:63608429..63612556

Molecular Weight (calculated)

67555.1 Da

IEP (calculated)

8.722

GRAVY (calculated)

-0.384

Length

576 amino acids

Sequence
(BLAST)

001: MIMKSLPSKA LIIKINLVFL ACFLIGYAAI LLKPSTYVYH EYATSLVRCS LRECHHKGEG GIKMKAVLEE KIVMNEEKRM VLKREKPSFL NKMGRGMKIG
101: MVNMEGEDVS EWKIYGQITN IKFEKVSNLF EWKDIFPEWI DEEEEMDGPM CPEIPMPNFN NYRDNMDMLV VKLPCKYPQE GWGRDVYRLQ VNLVAANLAV
201: KRGNGKKMKL IFLSKCRPMV EMFRCEELKK KEGDWWYYES NMDKLAQKVS LPIGSCMLAL PLWGKEINEV YDISKIERST KVPTREAYAT VLHSSETYVC
301: GAITLAQSLL RTGTKRDLIL LLDNSISESK RDALIKAGWK LRFIKRIRNP RAEKNTYNEY NYSKFRLWQL TDYDKIIFID ADIIVLRNID LLFHFPQMTA
401: TGNDASIFNS GIMVIEPSNC TFKMFMKRTK EIISYNGGDQ GFLNEVFVWW HRLPRRVNFL KNFWSNNSNE VSVKNQLFAA DPPKVYSIHY LGLKPWVCYR
501: DYDCNWDIGD QRVYASDIAH ETWWKLHDSM DESLQKFCGL TEQRKIELEW DRKLAGKIGF EDEHWRMNVT DPRKFS

Best Arabidopsis Sequence Match ( AT4G33330.2 )
(BLAST)

001: MTIMTMIMKM APSKSALIRF NLVLLGFSFL LYTAIFFHPS SSVYFSSGAS FVGCSFRDCT PKVVRGVKMQ ELVEENEINK KDLLTASNQT KLEAPSFMEE
101: ILTRGLGKTK IGMVNMEECD LTNWKRYGET VHIHFERVSK LFKWQDLFPE WIDEEEETEV PTCPEIPMPD FESLEKLDLV VVKLPCNYPE EGWRREVLRL
201: QVNLVAANLA AKKGKTDWRW KSKVLFWSKC QPMIEIFRCD DLEKREADWW LYRPEVVRLQ QRLSLPVGSC NLALPLWAPQ GVDKVYDLTK IEAETKRPKR
301: EAYVTVLHSS ESYVCGAITL AQSLLQTNTK RDLILLHDDS ISITKLRALA AAGWKLRRII RIRNPLAEKD SYNEYNYSKF RLWQLTDYDK VIFIDADIIV
401: LRNLDLLFHF PQMSATGNDV WIYNSGIMVI EPSNCTFTTI MSQRSEIVSY NGGDQGYLNE IFVWWHRLPR RVNFLKNFWS NTTKERNIKN NLFAAEPPQV
501: YAVHYLGWKP WLCYRDYDCN YDVDEQLVYA SDAAHVRWWK VHDSMDDALQ KFCRLTKKRR TEINWERRKA RLRGSTDYHW KINVTDPRRR PNINFRMVSA
601: QLEKCLAFDE KGIKVINLAE EMENTL

Arabidopsis Description

PGSIP3plant glycogenin-like starch initiation protein 3 [Source:TAIR;Acc:AT4G33330]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.