Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92257 | Canola | plastid | 65.97 | 15.1 |
| CDY13574 | Canola | plastid | 46.53 | 14.47 |
| CDY53768 | Canola | plastid | 59.72 | 13.03 |
| CDY18535 | Canola | plastid | 59.72 | 13.03 |
| CDY38364 | Canola | extracellular, golgi | 45.14 | 11.71 |
| CDY38807 | Canola | endoplasmic reticulum, golgi, peroxisome | 46.53 | 10.86 |
| CDX96589 | Canola | golgi, peroxisome, plasma membrane | 46.53 | 10.84 |
| CDY04633 | Canola | golgi, mitochondrion, peroxisome | 47.22 | 10.64 |
| GSMUA_Achr6P10110_001 | Banana | endoplasmic reticulum | 35.42 | 9.71 |
| CDY41730 | Canola | endoplasmic reticulum, golgi | 34.03 | 8.8 |
| AT4G33330.2 | Thale cress | endoplasmic reticulum, golgi, plastid | 37.5 | 8.63 |
| CDX95254 | Canola | golgi | 33.33 | 8.62 |
| VIT_18s0001g10580.t01 | Wine grape | golgi | 34.72 | 8.47 |
| CDY32143 | Canola | golgi | 33.33 | 8.45 |
| Bra034558.1-P | Field mustard | endoplasmic reticulum, golgi, plasma membrane | 34.72 | 8.45 |
| CDY45037 | Canola | endoplasmic reticulum, golgi, plasma membrane | 34.72 | 8.45 |
| CDY32144 | Canola | endoplasmic reticulum, golgi | 32.64 | 8.39 |
| CDX75345 | Canola | golgi, plastid | 34.72 | 8.29 |
| CDY31118 | Canola | golgi | 32.64 | 8.27 |
| Zm00001d027938_P001 | Maize | plasma membrane | 34.03 | 8.26 |
| CDY22652 | Canola | golgi | 31.94 | 8.11 |
| TraesCS4A01G004100.1 | Wheat | golgi | 33.33 | 8.11 |
| KRH05688 | Soybean | golgi | 33.33 | 8.11 |
| TraesCS4B01G301200.1 | Wheat | golgi | 33.33 | 8.09 |
| CDX68968 | Canola | golgi | 34.03 | 8.09 |
| KRH15352 | Soybean | golgi | 33.33 | 8.08 |
| TraesCS4D01G299500.1 | Wheat | golgi | 33.33 | 8.07 |
| EER95378 | Sorghum | golgi, plastid | 33.33 | 7.93 |
| GSMUA_Achr3P01740_001 | Banana | endoplasmic reticulum, golgi | 29.86 | 7.88 |
| Solyc04g078990.2.1 | Tomato | golgi | 31.25 | 7.81 |
| Solyc04g078980.2.1 | Tomato | golgi | 30.56 | 7.8 |
| PGSC0003DMT400020678 | Potato | golgi | 30.56 | 7.8 |
| KRH61283 | Soybean | golgi | 31.94 | 7.73 |
| Os03t0184300-02 | Rice | golgi | 32.64 | 7.65 |
| GSMUA_Achr2P22380_001 | Banana | extracellular, golgi, plastid | 31.25 | 7.6 |
| PGSC0003DMT400020680 | Potato | golgi | 30.56 | 7.6 |
| CDY28292 | Canola | golgi | 34.72 | 6.77 |
| CDY50243 | Canola | cytosol, peroxisome, plastid, vacuole | 47.22 | 6.57 |
| CDY06343 | Canola | golgi | 22.92 | 6.01 |
| CDX84174 | Canola | plasma membrane | 5.56 | 1.62 |
| CDY40445 | Canola | plasma membrane | 5.56 | 1.62 |
| CDY58112 | Canola | plasma membrane | 5.56 | 1.51 |
| CDY02625 | Canola | plasma membrane | 5.56 | 1.5 |
| CDY29996 | Canola | extracellular, plasma membrane | 4.86 | 1.28 |
| CDX70822 | Canola | plasma membrane | 4.17 | 1.13 |
| CDX88935 | Canola | plasma membrane | 4.17 | 1.12 |
| CDY21129 | Canola | extracellular, golgi, plasma membrane | 4.17 | 1.1 |
| CDY32275 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 2.78 | 0.94 |
| CDY32093 | Canola | cytosol | 2.78 | 0.93 |
| CDY40528 | Canola | plasma membrane | 2.08 | 0.54 |
| CDY28291 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX99330 | EnsemblPlantsGene:GSBRNA2T00107621001 | ProteinID:CDX99330 | ProteinID:CDX99330.1 | SEG:seg | UniParc:UPI0004EDC22F |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g34450D
Coordinates
chrLK031909:+:1182674..1183108
Molecular Weight (calculated)
16496.8 Da
IEP (calculated)
4.904
GRAVY (calculated)
-0.403
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKTIESVQE GLTIGVLNFG RKEIRQWREV AKTKDNEDDE NVVELDLEHA DKNVTWDALY PEWIDEEQEK YVHVCPNLPK IKVPTRRLDL VVVKLPCLKE
101: GNWSRDVARL HLQMAAATVA ASAKGQRSRD VCLEMFPDAE SILV
101: GNWSRDVARL HLQMAAATVA ASAKGQRSRD VCLEMFPDAE SILV
001: MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS
101: HSSSRRQDPR YFSDLDINWD DVTKTLENIE EGRTIGVLNF DSNEIQRWRE VSKSKDNGDE EKVVVLNLDY ADKNVTWDAL YPEWIDEEQE TEVPVCPNIP
201: NIKVPTRRLD LIVVKLPCRK EGNWSRDVGR LHLQLAAATV AASAKGFFRG HVFFVSRCFP IPNLFRCKDL VSRRGDVWLY KPNLDTLRDK LQLPVGSCEL
301: SLPLGIQDRP SLGNPKREAY ATILHSAHVY VCGAIAAAQS IRQSGSTRDL VILVDDNISG YHRSGLEAAG WQIRTIQRIR NPKAEKDAYN EWNYSKFRLW
401: QLTDYDKIIF IDADLLILRN IDFLFSMPEI SATGNNGTLF NSGVMVIEPC NCTFQLLMEH INEIESYNGG DQGYLNEVFT WWHRIPKHMN FLKHFWIGDE
501: DDAKRKKTEL FGAEPPVLYV LHYLGMKPWL CYRDYDCNFN SDIFVEFATD IAHRKWWMVH DAMPQELHQF CYLRSKQKAQ LEYDRRQAEA ANYADGHWKI
601: RVKDPRFKIC IDKLCNWKSM LRHWGESNWT DYESFVPTPP AITVDRRSSL PGHNL
101: HSSSRRQDPR YFSDLDINWD DVTKTLENIE EGRTIGVLNF DSNEIQRWRE VSKSKDNGDE EKVVVLNLDY ADKNVTWDAL YPEWIDEEQE TEVPVCPNIP
201: NIKVPTRRLD LIVVKLPCRK EGNWSRDVGR LHLQLAAATV AASAKGFFRG HVFFVSRCFP IPNLFRCKDL VSRRGDVWLY KPNLDTLRDK LQLPVGSCEL
301: SLPLGIQDRP SLGNPKREAY ATILHSAHVY VCGAIAAAQS IRQSGSTRDL VILVDDNISG YHRSGLEAAG WQIRTIQRIR NPKAEKDAYN EWNYSKFRLW
401: QLTDYDKIIF IDADLLILRN IDFLFSMPEI SATGNNGTLF NSGVMVIEPC NCTFQLLMEH INEIESYNGG DQGYLNEVFT WWHRIPKHMN FLKHFWIGDE
501: DDAKRKKTEL FGAEPPVLYV LHYLGMKPWL CYRDYDCNFN SDIFVEFATD IAHRKWWMVH DAMPQELHQF CYLRSKQKAQ LEYDRRQAEA ANYADGHWKI
601: RVKDPRFKIC IDKLCNWKSM LRHWGESNWT DYESFVPTPP AITVDRRSSL PGHNL
Arabidopsis Description
GUX1UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSB1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.