Factsheet for TraesCS2B01G399000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G378200.1	Wheat	plasma membrane	98.52	98.52
TraesCS2A01G381700.1	Wheat	plasma membrane	98.15	97.97
HORVU2Hr1G089320.8	Barley	cytosol	85.93	96.47
EES11117	Sorghum	plasma membrane	85.93	86.57
Zm00001d025865_P001	Maize	plasma membrane	84.63	85.26
TraesCS6B01G257400.2	Wheat	plasma membrane	70.0	78.75
Os04t0517400-01	Rice	cytosol, plasma membrane	42.41	77.36
GSMUA_Achr5P18580_001	Banana	plasma membrane	65.74	64.9
GSMUA_Achr11P...	Banana	plasma membrane	62.59	62.94
Solyc05g055040.2.1	Tomato	plasma membrane	60.74	61.54
Solyc04g009920.2.1	Tomato	golgi	60.74	61.54
PGSC0003DMT400029873	Potato	plasma membrane	60.74	61.54
VIT_14s0036g00430.t01	Wine grape	golgi	61.85	61.17
PGSC0003DMT400060425	Potato	plasma membrane	60.19	60.98
KRG92718	Soybean	endoplasmic reticulum	59.26	59.15
Bra006462.1-P	Field mustard	plasma membrane	58.15	58.69
KRH68773	Soybean	endoplasmic reticulum	59.63	58.44
KRG97021	Soybean	endoplasmic reticulum	59.63	58.44
AT5G18480.1	Thale cress	golgi	57.96	58.29
CDX70822	Canola	plasma membrane	57.22	58.08
CDY58112	Canola	plasma membrane	56.85	57.92
CDX88935	Canola	plasma membrane	57.22	57.87
CDY29996	Canola	extracellular, plasma membrane	57.78	57.14
CDY02625	Canola	plasma membrane	56.3	57.04
Bra040140.1-P	Field mustard	extracellular, golgi, plasma membrane	57.59	56.96
CDY21129	Canola	extracellular, golgi, plasma membrane	57.41	56.78
Bra023678.1-P	Field mustard	plasma membrane	55.37	56.1
KRH34122	Soybean	plasma membrane	51.11	53.49
TraesCS2B01G430800.1	Wheat	plasma membrane	16.11	18.51
TraesCS1B01G225300.1	Wheat	golgi	15.93	16.6
TraesCS1B01G277500.1	Wheat	cytosol, golgi, peroxisome	18.15	15.56
TraesCS3B01G442700.1	Wheat	golgi	17.96	15.3
TraesCS4B01G301200.1	Wheat	golgi	16.67	15.18
TraesCS5B01G074000.1	Wheat	cytosol, golgi, peroxisome	17.59	14.8
TraesCS3B01G414000.1	Wheat	plastid	16.11	14.52

Protein Annotations

EnsemblPlants:TraesCS2B01G399000.1	EnsemblPlantsGene:TraesCS2B01G399000	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_8	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR11183	PANTHER:PTHR11183:SF65
PFAM:PF01501	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53448	TIGR:cd02537	TMHMM:TMhelix
MapMan:5.4.13.2	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:566618533..566623971

Molecular Weight (calculated)

60521.2 Da

IEP (calculated)

8.770

GRAVY (calculated)

0.098

Length

540 amino acids

Sequence
(BLAST)

001: MGPPPSRLPL LAALVAAALL AGAAAATEEA YVTLLYGDEF VLGVRVLGKS IRDTGTRRDM VVLVSDGVSE YSRQLLEADG WIVKRITLLA NPNQVRPTRF
101: WGVYTKLKIF NMTSYKKVVY LDADTVVVKS IEDVFKCGKF CGNLKHSERM NSGVMVVEPS ETVFKDMISQ VDRLPSYTGG DQGFLNSYYA DFANSRVYEP
201: DSPLTPEPET QRLSTLYNAD VGLYMLANKW MVDEKELRVI HYTLGPLKPW DWWTAWLVKP VEIWQDVRQK LEESLPGTGG GRNPHDQLVV KFLFILPFCL
301: LLFGYYQSCF QNNKDFPSVQ SLCVFARRGR HKYKSEEALP SYSAVGVSSS TFSTSNQRIS NGPHLKLPSY FGAIAVLICF MSAGVSLAFA FTIIPRQIMP
401: WTGLLLMFEW TFVAFFLLFG GYLRFVYRWG SISATHVGYS NSDSSENHMS TGHQRNISDF DMEATFYWAG MAVIAVITVF SPTILGITAL FTKLGLMVAG
501: GVLLASFMTY ASVHLAISAF HKGQKDRNAS RTRRICFWCL

Best Arabidopsis Sequence Match ( AT5G18480.1 )
(BLAST)

001: MVRLKTSLWV LLLALVSIQL NGSFGSESSK VAYVTLLYGD EFLLGVRVLG KSIRDTGSTK DMVALVSDGV SDYSKKLLKA DGWKVEKISL LANPNQVHPT
101: RFWGVYTKLK IFNMTDYKKV VYLDADTIVV KNIEDLFKCS KFCANLKHSE RLNSGVMVVE PSEALFNDMM RKVKTLSSYT GGDQGFLNSY YPDFPNARVF
201: DPSVTPEVLK TRPVPAMERL STLYNADVGL YMLANKWMVD DSKLHVIHYT LGPLKPWDWW TAWLVKPVDA WHSIRVKLEE TLPGTGGGSN QHDELVVKFL
301: FLLPLCALLF CIYRSIQGRE GSLCWSSFSN QIRYLYYKVR SNGTLGYGGV STMSPSYQPH SGNAQSKVPQ HLGAVSVVVC FTAVLLSLGI SFAIVPRQIM
401: PWTGLVLVYE WTFTIFFLLF GVFLLFVHQH GKRIAIQSES SSLDDSAKVH QRAGGSCDVT TLYYGLGMAF LAIAAVSLPY ILGITALFTR LGLMVGLAII
501: LAAFMTYASE HLAVRWFLKG LEDRRDTTRS NSLCFLC

Arabidopsis Description

IPUT1Inositol phosphorylceramide glucuronosyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWB7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.