Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32275 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane | 79.15 | 91.57 |
| Bra038490.1-P | Field mustard | plasma membrane | 88.66 | 89.75 |
| AT2G35710.1 | Thale cress | plasma membrane | 79.35 | 78.87 |
| VIT_00s2563g00010.t01 | Wine grape | cytosol, plasma membrane | 54.86 | 70.94 |
| KRH77365 | Soybean | cytosol, peroxisome | 46.56 | 69.7 |
| OQU82100 | Sorghum | plasma membrane | 59.92 | 69.16 |
| GSMUA_Achr11P... | Banana | cytosol | 60.32 | 69.14 |
| GSMUA_Achr8P11090_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 60.12 | 68.91 |
| GSMUA_Achr5P20900_001 | Banana | plasma membrane | 59.11 | 67.75 |
| GSMUA_Achr5P15460_001 | Banana | cytosol | 59.11 | 67.75 |
| Os04t0553800-01 | Rice | cytosol, mitochondrion, plastid | 60.73 | 67.42 |
| GSMUA_Achr5P13360_001 | Banana | cytosol | 58.7 | 67.29 |
| KRH28078 | Soybean | plasma membrane | 63.56 | 66.53 |
| HORVU2Hr1G097240.1 | Barley | cytosol, mitochondrion, plasma membrane | 59.11 | 66.21 |
| GSMUA_Achr1P01490_001 | Banana | cytosol | 57.69 | 66.13 |
| PGSC0003DMT400012126 | Potato | plasma membrane | 63.56 | 65.97 |
| KRH04125 | Soybean | plasma membrane | 63.56 | 65.97 |
| Solyc08g078650.2.1 | Tomato | plasma membrane | 62.35 | 65.67 |
| KRH57402 | Soybean | extracellular, golgi, plasma membrane | 63.36 | 65.62 |
| Zm00001d002725_P001 | Maize | plasma membrane | 60.93 | 64.18 |
| TraesCS2A01G412200.1 | Wheat | plasma membrane | 59.92 | 62.84 |
| HORVU1Hr1G054100.7 | Barley | mitochondrion | 57.09 | 62.81 |
| TraesCS2D01G409400.1 | Wheat | plasma membrane | 60.12 | 62.79 |
| TraesCS2B01G430800.1 | Wheat | plasma membrane | 59.72 | 62.77 |
| CDY40528 | Canola | plasma membrane | 70.04 | 62.34 |
| OQU92160 | Sorghum | golgi, mitochondrion | 58.5 | 59.47 |
| TraesCS1D01G214700.1 | Wheat | golgi | 58.1 | 58.81 |
| Zm00001d047104_P001 | Maize | golgi, mitochondrion | 58.1 | 58.81 |
| TraesCS1A01G211500.1 | Wheat | golgi, plasma membrane | 58.1 | 58.45 |
| Os10t0555100-01 | Rice | golgi, plasma membrane | 57.69 | 57.93 |
| Zm00001d029920_P001 | Maize | mitochondrion | 58.1 | 56.5 |
| Zm00001d026165_P003 | Maize | plasma membrane | 53.64 | 55.44 |
| TraesCS1B01G225300.1 | Wheat | golgi | 56.88 | 54.25 |
| AT5G18480.1 | Thale cress | golgi | 20.24 | 18.62 |
| AT1G08990.1 | Thale cress | golgi | 14.57 | 12.72 |
| AT1G54940.1 | Thale cress | golgi | 12.96 | 11.49 |
| AT4G33330.2 | Thale cress | endoplasmic reticulum, golgi, plastid | 13.97 | 11.02 |
| AT1G77130.1 | Thale cress | golgi | 13.77 | 11.0 |
| AT3G18660.2 | Thale cress | plastid | 14.17 | 10.62 |
Protein Annotations
| Gene3D:3.90.550.10 | MapMan:35.1 | EntrezGene:827361 | UniProt:A0A178V229 | ProteinID:AEE83775.1 | ArrayExpress:AT4G16600 |
| EnsemblPlantsGene:AT4G16600 | RefSeq:AT4G16600 | TAIR:AT4G16600 | RefSeq:AT4G16600-TAIR-G | EnsemblPlants:AT4G16600.1 | TAIR:AT4G16600.1 |
| ProteinID:CAB10435.1 | ProteinID:CAB78702.1 | UniProt:F4JMI5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0046872 |
| InterPro:IPR029044 | EMBL:KJ138749 | RefSeq:NP_193393.4 | InterPro:Nucleotide-diphossugar_trans | ProteinID:OAO99750.1 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11183 | PANTHER:PTHR11183:SF93 | SUPFAM:SSF53448 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000443252 | UniProt:W8Q6K0 | : | : |
Description
PGSIP7Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6K0]
Coordinates
chr4:+:9349741..9352832
Molecular Weight (calculated)
56999.9 Da
IEP (calculated)
8.498
GRAVY (calculated)
0.172
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLQRTLMFS CWVLSLLIIK TTAYNEKQLF QPLETENANA MTAVMERGLK TQRRPEHKNA YATMMYMGTP RDYEFYVATR VLIRSLKSLH VDADIVVIAS
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY
101: LDVPINWIHA LEEEDGAKVV RVENLENPYK KQTNFDNRFK LSLNKLYAWS LSDYDRVVML DVDNLFLKNT DELFQCGQFC AVFINPCIFH TGLFVLQPSM
201: EVFRDMLHEL EVKRDNPDGA DQGFLVSYFS DLLNQPLFRP PPDNRTALKG HFRLPLGYQM DASYYYLKLR WNVPCGPNSV ITFPGAVWLK PWYWWSWPVL
301: PLGLSWHHQR RYTISYSAEM PWVLTQAVFY LGIILVTRLA RPNMTKLCYR RSDKNLSMIQ TAFKFVALLF ILSAYIIPFF IIPQTIHPLI GWSLYLTGSF
401: ALSTIPINAF LLPILPVITP WLGIFGTLLV MAFPSYPDGV VRALSVFGYA FCCAPFLWVS FVKITSHLQI MIDKEVLFPR LGESGVTSGL SKLY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.