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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042817_P001 Maize golgi 87.6 86.91
TraesCS3D01G374500.1 Wheat plastid 52.15 54.94
TraesCS3A01G381300.1 Wheat golgi 51.51 53.82
TraesCS3B01G414000.1 Wheat plastid 50.56 53.09
EES01856 Sorghum golgi 44.52 44.23
EES19558 Sorghum golgi 44.36 44.22
KXG30414 Sorghum mitochondrion 43.72 41.98
EER95378 Sorghum golgi, plastid 39.9 41.49
KRH43404 Soybean cytosol 12.72 28.57
EES11117 Sorghum plasma membrane 13.67 16.04
OQU92160 Sorghum golgi, mitochondrion 12.08 15.64
OQU82100 Sorghum plasma membrane 9.54 14.02
Protein Annotations
MapMan:21.2.2.1.2.1Gene3D:3.90.550.10EntrezGene:8058929UniProt:C5XQF4EnsemblPlants:EES03905ProteinID:EES03905
ProteinID:EES03905.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005794GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009834GO:GO:0009987GO:GO:0015020GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0016757GO:GO:0045492InterPro:GUXInterPro:Glyco_trans_8InterPro:IPR029044InterPro:Nucleotide-diphossugar_trans
PFAM:PF01501PANTHER:PTHR11183PANTHER:PTHR11183:SF45EnsemblPlantsGene:SORBI_3003G360500SUPFAM:SSF53448TMHMM:TMhelix
UniParc:UPI0001A85201RefSeq:XP_002458785.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:-:67808197..67811098
Molecular Weight (calculated)
69537.3 Da
IEP (calculated)
7.884
GRAVY (calculated)
-0.197
Length
629 amino acids
Sequence
(BLAST)
001: MTGGVRKRTG FSKLLVVLLF FVCAIVIVAL LVRGNGCCVV VQVAVLPRIT SVGSSWDASP TATTQSGKTI IPATSTRGAS SPAHDLQEDS EAVSASEEEE
101: APAAAAAPYA ADSRWNIQWE SVASVLSSFS SNGTGRRGIA RVGLLNFNSS EVARWTSTLP AADVRAVSLA PAADAVTWQA LYPNWIDEES NRSSCPTLPN
201: PDAAPHHHNF DLVAVKLPCR GQDWSRDVRR LHLQLAAAKL TLHGSSSSSS KAGMVLILSE SGCLPLPNLF PCKHLFARRG HAFLYRPEAT YLRHRLNLPV
301: GSCQLAVPFL RPSPTKLPSA TPPGTSRTSR QAYATVLHSA DAYVCGAIAL AQSIRQSGST RDLVALVDAH NVGAEHRAAL AAAGWQVRLA PRIRNPHAEA
401: NAYNEWNYSK FRLWQLTDYE KVVFLDADLL VLRNMDFLFE EAPELSATVN SGARFNSGVM VLEPCSCTFD LLMSGIHDIE SYNGGDQGYL NEVFTWWHRL
501: PRHVNFLKYV WAEGDRAAQA RMLTAEPAEV HAVHYLGMKP WLCYRDYDCN WNVAELRRFA SDEAHARWWA VHDRIEPAEL RDRFCALPTS HMEVLEQQRR
601: EAATVNAPDG HWNRTITDPR RRIKAHYHH
Best Arabidopsis Sequence Match ( AT1G77130.1 )
(BLAST)
001: MIPSSSPMES RHRLSFSNEK TSRRRFQRIE KGVKFNTLKL VLICIMLGAL FTIYRFRYPP LQIPEIPTSF GLTTDPRYVA TAEINWNHMS NLVEKHVFGR
101: SEYQGIGLIN LNDNEIDRFK EVTKSDCDHV ALHLDYAAKN ITWESLYPEW IDEVEEFEVP TCPSLPLIQI PGKPRIDLVI AKLPCDKSGK WSRDVARLHL
201: QLAAARVAAS SKGLHNVHVI LVSDCFPIPN LFTGQELVAR QGNIWLYKPN LHQLRQKLQL PVGSCELSVP LQAKDNFYSA GAKKEAYATI LHSAQFYVCG
301: AIAAAQSIRM SGSTRDLVIL VDETISEYHK SGLVAAGWKI QMFQRIRNPN AVPNAYNEWN YSKFRLWQLT EYSKIIFIDA DMLILRNIDF LFEFPEISAT
401: GNNATLFNSG LMVVEPSNST FQLLMDNINE VVSYNGGDQG YLNEIFTWWH RIPKHMNFLK HFWEGDEPEI KKMKTSLFGA DPPILYVLHY LGYNKPWLCF
501: RDYDCNWNVD IFQEFASDEA HKTWWRVHDA MPENLHKFCL LRSKQKAQLE WDRRQAEKGN YKDGHWKIKI KDKRLKTCFE DFCFWESMLW HWGETNSTNN
601: SSTTTTSSPP HKTALPSL
Arabidopsis Description
GUX3Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178WC33]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.