Factsheet for Os02t0609900-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0614966-00	Rice	extracellular	27.09	41.0
Os02t0610000-00	Rice	extracellular	45.59	39.2
HORVU7Hr1G002010.2	Barley	mitochondrion	35.68	38.48
TraesCS3D01G463800.1	Wheat	extracellular, plasma membrane	42.51	37.4
Os11t0172300-01	Rice	plasma membrane	30.84	37.14
Zm00001d007750_P001	Maize	extracellular	26.87	35.57
TraesCS7A01G018700.1	Wheat	plastid	34.8	32.78
Os07t0251900-01	Rice	vacuole	34.36	32.16
Os02t0615400-00	Rice	mitochondrion, plastid	13.44	31.94
HORVU7Hr1G002130.8	Barley	mitochondrion	47.58	25.0
Os02t0615500-01	Rice	plasma membrane	51.32	22.6
TraesCS1A01G337300.1	Wheat	plasma membrane	48.68	21.71
Os07t0121200-00	Rice	plasma membrane	48.24	21.53
Os11t0172150-00	Rice	plasma membrane	44.93	20.12
Os11t0171800-01	Rice	plasma membrane	44.27	19.57
Os04t0122200-00	Rice	plasma membrane	39.65	19.31
Os06t0667000-01	Rice	plasma membrane	41.63	17.81
Os11t0173432-00	Rice	plasma membrane	43.17	14.65
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	15.2	12.85
Os11t0172350-00	Rice	golgi, plasma membrane	0.44	0.52
Os11t0172400-00	Rice	cytosol	0.0	0.0
Os11t0173550-01	Rice	cytosol	0.0	0.0
Os06t0339500-01	Rice	cytosol, peroxisome	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4329947	ProteinID:BAF09310.1	ProteinID:BAS79702.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlantsGene:Os02g0609900	EnsemblPlants:Os02t0609900-00	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	PANTHER:PTHR43887	PANTHER:PTHR43887:SF32	UniProt:Q0DZM8	SMART:SM00369	SUPFAM:SSF52058
SignalP:SignalP-noTM	UniParc:UPI0000DF07A4	RefSeq:XP_015624113.1	SEG:seg	:	:

Description

Leucine-rich repeat, N-terminal domain containing protein. (Os02t0609900-00)

Coordinates

chr2:+:23952926..23954302

Molecular Weight (calculated)

49410.9 Da

IEP (calculated)

8.678

GRAVY (calculated)

0.059

Length

454 amino acids

Sequence
(BLAST)

001: MLVALFAALV LLCYSAGNIH CVVAVHGNDS DMLALLEFKD AIGDDPAGVL SSWNKTTPFC RWNGVKCGRR EHRVTALELA GQNLTGRLAA ASLGNLSYLH
101: LLDLSGNRFS GQIPRLNSLR KLQVLNLSNN ILDGIIPDTL TNCSSLTQLD LSINLFQGQI PLGIGLLSEL SDLVLSRNYL SGHIPSELGK LSKLSSLDLS
201: VNIISGEIPR ALYNLSSLRM LFLEMNFLGK SLPSNIGYAL PNLQWLLLGV NMFQGNIPGS LGNISQLHLI YLSENNFSGQ IPSSLGKLSN LSVNLQYLLL
301: DGNNLSGHIP SNMGNLQQLT QLDLSYNNLK GKMPPSLGNL QRLVSFNLSN NNLQGDIPSK FGDLQQLVWL NLGNNYLHGE VPSSVANLQQ LVLLDLSHNN
401: LSGKVPRSLG NLPKLRQLDL SHNNFGGKIP SSLANLRQLS RLDLSYNSLK GFYA

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.