Factsheet for TraesCS3D01G463800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G018700.1	Wheat	plastid	56.4	60.37
Os02t0610000-00	Rice	extracellular	51.55	50.38
TraesCS5D01G324100.1	Wheat	extracellular	31.98	49.7
TraesCS7D01G496400.1	Wheat	extracellular	32.75	47.47
TraesCS1D01G399900.1	Wheat	plastid	45.35	45.79
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	33.14	45.0
Os02t0615400-00	Rice	mitochondrion, plastid	16.47	44.5
TraesCS6D01G205800.1	Wheat	extracellular	11.43	44.03
HORVU7Hr1G002130.8	Barley	mitochondrion	73.45	43.87
Zm00001d007750_P001	Maize	extracellular	28.68	43.15
Os02t0609900-00	Rice	extracellular	37.4	42.51
TraesCS6D01G385200.1	Wheat	mitochondrion	31.98	42.42
TraesCS7D01G006200.1	Wheat	plasma membrane	43.99	40.61
KRH73172	Soybean	extracellular, vacuole	23.45	36.45
TraesCS6D01G385000.1	Wheat	mitochondrion	8.53	33.59
TraesCS4D01G106600.1	Wheat	vacuole	41.28	32.77
CDY65706	Canola	extracellular, plasma membrane	36.63	27.47
CDY49183	Canola	extracellular, plasma membrane	36.43	27.33
Bra014313.1-P	Field mustard	cytosol	37.98	27.11
CDY60624	Canola	plasma membrane	36.05	26.96
TraesCS7D01G144900.1	Wheat	plasma membrane	50.97	26.01
TraesCS6D01G206100.1	Wheat	plasma membrane	50.97	25.51
KRH76431	Soybean	plasma membrane	38.18	25.49
TraesCS2D01G475300.1	Wheat	plasma membrane	45.54	24.58
TraesCS6D01G206000.1	Wheat	plasma membrane	50.19	23.52
TraesCS4D01G107000.1	Wheat	plasma membrane	43.6	22.19
TraesCS4D01G106900.1	Wheat	plasma membrane	42.64	21.67
TraesCS3D01G060300.1	Wheat	plasma membrane	42.05	21.4
TraesCS4D01G003300.1	Wheat	plasma membrane	40.7	21.3
TraesCS6D01G205900.1	Wheat	plasma membrane	32.36	20.19
TraesCS4D01G081700.1	Wheat	cytosol, nucleus, peroxisome	32.95	20.07
PGSC0003DMT400031158	Potato	plasma membrane	36.82	19.81
Bra018128.1-P	Field mustard	plasma membrane	39.92	19.81
CDY00454	Canola	plasma membrane	37.4	19.55
Bra015204.1-P	Field mustard	plasma membrane	38.18	19.54
TraesCS2D01G067800.1	Wheat	plasma membrane, plastid	38.76	19.32
Bra029191.1-P	Field mustard	plasma membrane	36.24	19.26
AT3G47090.1	Thale cress	plasma membrane	37.6	19.23
TraesCS6D01G000800.2	Wheat	mitochondrion, plastid	31.98	18.9
Bra005562.1-P	Field mustard	plasma membrane	37.02	18.62
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	36.24	18.26
TraesCS2D01G013100.1	Wheat	plasma membrane	34.3	17.22
TraesCS3D01G060500.1	Wheat	mitochondrion, plasma membrane	28.68	16.48
TraesCS2D01G474300.1	Wheat	plasma membrane	23.45	16.07
CDX71113	Canola	plasma membrane	18.99	14.29
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	12.6	12.1
TraesCS3D01G003700.1	Wheat	cytosol	14.92	11.39
TraesCS3D01G060000.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263
PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR43887	PANTHER:PTHR43887:SF32	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G463800	EnsemblPlants:TraesCS3D01G463800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:567855694..567857244

Molecular Weight (calculated)

55875.9 Da

IEP (calculated)

8.295

GRAVY (calculated)

0.087

Length

516 amino acids

Sequence
(BLAST)

001: MVSTCPKRPG NPGVLILLTL PLLLLGAIKI NCATLPDNST DVLWLQAFRH EIISDPSGWF SSWNSSANHC LWPGVRCSRA HLGRVVALQL VGLNLAGQIS
101: SSIGNLTFLR TLNLSTNGFS GRLPPLNHLQ KLQVLDLSVN QLQDSIPDAI TNCSSLRIVD LAKNILVGEI PPKLSLLYNL SHLRLSRNKL TGIIPPTLGN
201: ITSIQRLVLS YNNLTGSIPD ELGKLTNMRN VALGGNRLSG GFPRCLFNLS KSLQVLALES NMLSKQLPPN IGDALPNLQE LFLNTNVFEG RIPASLGNVS
301: GLGRIQLEIN NLTGEIPSSL GKLSNMYVLN LRNNNLEAID IQSWEFFSAL TNCTSLEWLS LAENQLHGAI PNTIGNLSSI LDYLYLGGNE LSGTVPPSIG
401: NLRNLTFLGL GNNNLTGTLE EWIGKLIKLK HLNLQMNSFI GPLSSFLGQL THLIDLDLGN NKFEGPIPSN IGNLQQLSTL NLSSNNIQGD IPTQLGSITS
501: LTHLDLSSNK LTGRIS

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.