Factsheet for TraesCS6D01G385200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	80.98	90.0
TraesCS6A01G401200.1	Wheat	extracellular, mitochondrion, plastid, vacuole	87.66	89.97
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	89.46	89.46
HORVU6Hr1G092260.1	Barley	extracellular, vacuole	78.66	87.43
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	84.32	86.32
HORVU6Hr1G092210.11	Barley	cytosol, extracellular, golgi, mitochondrion	83.03	85.22
TraesCS6D01G385000.1	Wheat	mitochondrion	22.36	66.41
TraesCS1D01G399900.1	Wheat	plastid	56.81	43.25
TraesCS5D01G324100.1	Wheat	extracellular	35.73	41.87
TraesCS6D01G205800.1	Wheat	extracellular	14.4	41.79
TraesCS7D01G496400.1	Wheat	extracellular	37.28	40.73
TraesCS3D01G463800.1	Wheat	extracellular, plasma membrane	42.42	31.98
TraesCS7D01G006200.1	Wheat	plasma membrane	42.16	29.34
KRH73172	Soybean	extracellular, vacuole	24.42	28.61
TraesCS4D01G106600.1	Wheat	vacuole	36.5	21.85
CDY60624	Canola	plasma membrane	33.93	19.13
CDY49183	Canola	extracellular, plasma membrane	33.42	18.9
CDY65706	Canola	extracellular, plasma membrane	33.42	18.9
Bra014313.1-P	Field mustard	cytosol	33.93	18.26
TraesCS2D01G475300.1	Wheat	plasma membrane	44.73	18.2
TraesCS7D01G144900.1	Wheat	plasma membrane	43.44	16.72
KRH76431	Soybean	plasma membrane	32.9	16.56
TraesCS6D01G206100.1	Wheat	plasma membrane	43.19	16.29
TraesCS6D01G206000.1	Wheat	plasma membrane	43.7	15.44
TraesCS4D01G106900.1	Wheat	plasma membrane	38.82	14.88
TraesCS4D01G107000.1	Wheat	plasma membrane	38.3	14.69
TraesCS4D01G003300.1	Wheat	plasma membrane	35.48	14.0
TraesCS3D01G060300.1	Wheat	plasma membrane	35.99	13.81
Bra015204.1-P	Field mustard	plasma membrane	35.22	13.59
CDY00454	Canola	plasma membrane	34.19	13.48
AT3G47090.1	Thale cress	plasma membrane	34.7	13.38
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	34.96	13.28
PGSC0003DMT400031158	Potato	plasma membrane	32.65	13.24
Bra018128.1-P	Field mustard	plasma membrane	35.22	13.17
Bra005562.1-P	Field mustard	plasma membrane	34.45	13.06
Bra029191.1-P	Field mustard	plasma membrane	32.39	12.98
TraesCS2D01G067800.1	Wheat	plasma membrane, plastid	32.9	12.37
CDX71113	Canola	plasma membrane	21.59	12.24
TraesCS2D01G013100.1	Wheat	plasma membrane	30.85	11.67
TraesCS6D01G000800.2	Wheat	mitochondrion, plastid	23.91	10.65
TraesCS4D01G081700.1	Wheat	cytosol, nucleus, peroxisome	22.11	10.15
TraesCS6D01G205900.1	Wheat	plasma membrane	20.57	9.67
TraesCS3D01G060500.1	Wheat	mitochondrion, plasma membrane	19.02	8.24
TraesCS2D01G474300.1	Wheat	plasma membrane	12.08	6.24
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	7.2	5.21
TraesCS3D01G003700.1	Wheat	cytosol	5.14	2.96
TraesCS3D01G060000.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G385200.1	EnsemblPlantsGene:TraesCS6D01G385200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PFscan:PS51450	SEG:seg
SUPFAM:SSF52058	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:463078766..463091648

Molecular Weight (calculated)

42914.2 Da

IEP (calculated)

7.455

GRAVY (calculated)

0.042

Length

389 amino acids

Sequence
(BLAST)

001: MQERLPLRAI WPRKGALAAS LLGKGDGALS QVAMLAPIFM LLSLLLISYG VGSIRCSSTT VNGNIMDMIS LLDFKRDITN NSRQALRSWH ASVPLCSWEG
101: VHCSSGRVTK LYLNGRGLLG RIFPSLGNLT FLRTLDLSKN GFTGELPPLN RLNRLEYIDL GSNSLRGTIP DTLTNCSKLW ILDLSANLLM GEIPLGIGRL
201: SDLREVWLSS NNLTGKIPPS LKNISQLEEI VLTDNKLTGT IPDEMGIFPS LVYLDLAGNM LSGGIPETLY KYNQSSLQYL YLYSNMLGKT LPSNFGDTFP
301: DLKHLCLDNN NFEGHLPASL GNISRLRLLN LSSNNFIGQV PDSFGYLALL EYLILQRNNF WGFIPIELGD LKQLTHLDLS DNNLQGGVP

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.