Factsheet for TraesCS6A01G401200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, vacuole

Predictor Summary:

mitochondrion 3
extracellular 1
plastid 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G092260.1	Barley	extracellular, vacuole	82.85	89.71
HORVU6Hr1G092210.11	Barley	cytosol, extracellular, golgi, mitochondrion	88.92	88.92
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	82.06	88.86
TraesCS6D01G385200.1	Wheat	mitochondrion	89.97	87.66
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	89.18	86.89
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	40.9	66.24
TraesCS1A01G391800.1	Wheat	mitochondrion	58.05	44.99
TraesCS7A01G508200.1	Wheat	extracellular	37.99	40.45
TraesCS5A01G317700.1	Wheat	extracellular	35.09	40.06
TraesCS4A01G489900.1	Wheat	extracellular, plasma membrane	25.86	36.03
TraesCS4A01G489700.1	Wheat	plasma membrane	43.8	32.3
TraesCS7A01G018700.1	Wheat	plastid	39.58	31.12
KRH73172	Soybean	extracellular, vacuole	24.8	28.31
TraesCS3A01G061000.1	Wheat	cytosol	33.51	25.3
TraesCS1A01G169700.1	Wheat	plasma membrane, vacuole	36.68	20.06
CDY60624	Canola	plasma membrane	35.36	19.42
CDY65706	Canola	extracellular, plasma membrane	34.04	18.75
CDY49183	Canola	extracellular, plasma membrane	34.04	18.75
Bra014313.1-P	Field mustard	cytosol	35.62	18.67
TraesCS2A01G359700.1	Wheat	plasma membrane	46.44	17.44
TraesCS2A01G496000.1	Wheat	plasma membrane	40.37	17.04
KRH76431	Soybean	plasma membrane	33.77	16.56
TraesCS3A01G060200.1	Wheat	plasma membrane	39.58	16.56
TraesCS1A01G337300.1	Wheat	plasma membrane	43.8	16.31
TraesCS6A01G228900.1	Wheat	plasma membrane	46.44	15.52
TraesCS4A01G206000.1	Wheat	plasma membrane	40.37	15.1
TraesCS2A01G475400.1	Wheat	cytosol, nucleus, vacuole	12.66	14.68
TraesCS3A01G007200.1	Wheat	plasma membrane	39.31	14.62
TraesCS3A01G060100.1	Wheat	plasma membrane	38.79	14.54
Bra015204.1-P	Field mustard	plasma membrane	36.94	13.89
CDY00454	Canola	plasma membrane	35.88	13.78
Bra018128.1-P	Field mustard	plasma membrane	37.2	13.56
PGSC0003DMT400031158	Potato	plasma membrane	34.3	13.56
AT3G47090.1	Thale cress	plasma membrane	35.88	13.48
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	35.88	13.28
Bra005562.1-P	Field mustard	plasma membrane	35.88	13.26
Bra029191.1-P	Field mustard	plasma membrane	33.77	13.18
CDX71113	Canola	plasma membrane	21.64	11.95
TraesCS3A01G060000.1	Wheat	cytosol, peroxisome, plastid	19.79	8.83
TraesCS4A01G232200.1	Wheat	cytosol, plastid	12.66	6.32
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	7.39	5.21
TraesCS6A01G419000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	5.54	4.0
TraesCS5A01G474400.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G310800.1	Wheat	plastid	0.0	0.0
TraesCS3A01G060900.1	Wheat	plasma membrane, plastid	0.0	0.0
TraesCS1A01G391700.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6A01G401200.1	EnsemblPlantsGene:TraesCS6A01G401200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	SEG:seg	SUPFAM:SSF52058
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:609813988..609821699

Molecular Weight (calculated)

41610.5 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.051

Length

379 amino acids

Sequence
(BLAST)

001: MQERLPFRAI RPSKGDRALS QATRLAPIFM LLSLLLISCG VGSIRCSSTT VHGNITGMIS LLDFKRDITN DSRQALRSWQ ASVPLCSWEG VHCSSGRVTK
101: LYLSERELLG PISPSLGNLT FLRALDLSKN GFTGELPPLN RLHRLEYIDL GNNSLRGTIP ETLTNCSKLW SLDLSANLLM GEIPLGIGRL SNLRKVWLSS
201: NNLTGKIPPS LKNNSQLEGI VLTDNKLTGT IPDEMGIFSS LVNLDLAGNM LSGGIPETLY KYNQSSLQYL YLYSNMLGKT VPSNFGDTLP NLKHLCLDNN
301: NFEGHLPASL GNISELRLLN LSSNNFIGQV PGSFGNLALL EYLILQRNNF WGFLPIELGG LKQLTHLDLS DNNMQGGVP

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.