Factsheet for TraesCS4A01G489900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G489700.1	Wheat	plasma membrane	80.88	42.8
Os02t0614966-00	Rice	extracellular	43.01	39.0
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	32.35	37.61
TraesCS5A01G317700.1	Wheat	extracellular	38.24	31.33
TraesCS7A01G508200.1	Wheat	extracellular	39.34	30.06
TraesCS6A01G401200.1	Wheat	extracellular, mitochondrion, plastid, vacuole	36.03	25.86
KRH73172	Soybean	extracellular, vacuole	27.21	22.29
KXG21282	Sorghum	extracellular, vacuole	39.71	21.18
TraesCS1A01G391800.1	Wheat	mitochondrion	36.03	20.04
Zm00001d051094_P001	Maize	plasma membrane	41.18	18.92
TraesCS7A01G018700.1	Wheat	plastid	32.35	18.26
Zm00001d051088_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	42.28	18.05
TraesCS6A01G228900.1	Wheat	plasma membrane	65.44	15.7
TraesCS3A01G061000.1	Wheat	cytosol	27.94	15.14
Zm00001d051085_P001	Maize	plasma membrane	43.38	13.74
Zm00001d051093_P001	Maize	plasma membrane	44.49	13.73
TraesCS1A01G169700.1	Wheat	plasma membrane, vacuole	30.15	11.83
CDY65706	Canola	extracellular, plasma membrane	29.78	11.77
CDY60624	Canola	plasma membrane	29.78	11.74
CDY49183	Canola	extracellular, plasma membrane	29.41	11.63
Zm00001d051099_P001	Maize	plasma membrane	41.54	11.4
Bra014313.1-P	Field mustard	cytosol	29.78	11.2
TraesCS2A01G359700.1	Wheat	plasma membrane	38.24	10.31
TraesCS2A01G496000.1	Wheat	plasma membrane	33.82	10.24
KRH76431	Soybean	plasma membrane	29.04	10.22
TraesCS3A01G060200.1	Wheat	plasma membrane	33.82	10.15
CDX71113	Canola	plasma membrane	22.79	9.04
TraesCS4A01G206000.1	Wheat	plasma membrane	33.46	8.98
TraesCS1A01G337300.1	Wheat	plasma membrane	33.09	8.84
TraesCS3A01G007200.1	Wheat	plasma membrane	32.72	8.73
Bra018128.1-P	Field mustard	plasma membrane	31.99	8.37
PGSC0003DMT400031158	Potato	plasma membrane	28.68	8.13
AT3G47090.1	Thale cress	plasma membrane	30.15	8.13
Bra005562.1-P	Field mustard	plasma membrane	30.15	7.99
TraesCS3A01G060100.1	Wheat	plasma membrane	29.41	7.91
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	29.41	7.81
Bra015204.1-P	Field mustard	plasma membrane	28.31	7.64
Bra029191.1-P	Field mustard	plasma membrane	27.21	7.62
CDY00454	Canola	plasma membrane	26.1	7.19
TraesCS3A01G060000.1	Wheat	cytosol, peroxisome, plastid	8.46	2.71
Zm00001d051096_P001	Maize	cytosol, nucleus, peroxisome	5.51	1.91
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	3.31	1.68
TraesCS2A01G475400.1	Wheat	cytosol, nucleus, vacuole	0.37	0.31
TraesCS4A01G232200.1	Wheat	cytosol, plastid	0.74	0.26
TraesCS6A01G419000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	0.0	0.0
TraesCS1A01G391700.1	Wheat	mitochondrion	0.0	0.0
TraesCS5A01G474400.1	Wheat	cytosol	0.0	0.0
TraesCS4A01G310800.1	Wheat	plastid	0.0	0.0
TraesCS3A01G060900.1	Wheat	plasma membrane, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G489900.1	EnsemblPlantsGene:TraesCS4A01G489900	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
PANTHER:PTHR43887	PANTHER:PTHR43887:SF32	PFAM:PF08263	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:740446461..740447279

Molecular Weight (calculated)

29827.5 Da

IEP (calculated)

6.066

GRAVY (calculated)

0.334

Length

272 amino acids

Sequence
(BLAST)

001: MLLLLALLLL CNNGIGDVEG STIHDSSIVD LHALLDFKLG ITDDPRGALS NWSNNTHFCR WNGVNCTTTP PFRVRVLNLS GLNITGKIRS SLGNMTFLAW
101: LDLSSNNFVG PILTLDRLQQ LDTLYLYDNH LHGTIPDSLT NCSSLALVGV IPPKLHFLSH LFYFNLSLNS IVGQIPPKLG FLSDLTVLDL SVNSLVGQIP
201: PKLGLLSNLI YLDLSINLLV GQIPPSLGFL PNLAYIHLRS NQLEGSIPRE LGQLLELKEL FLSDNKLSGE LV

Best Arabidopsis Sequence Match ( AT5G06940.1 )
(BLAST)

001: MATRFKHQFS ISLALTFFFF FTKTFSFTEN EELGNLLRFK ASFDDPKGSL SGWFNTSSSH HCNWTGITCT RAPTLYVSSI NLQSLNLSGE ISDSICDLPY
101: LTHLDLSLNF FNQPIPLQLS RCVTLETLNL SSNLIWGTIP DQISEFSSLK VIDFSSNHVE GMIPEDLGLL FNLQVLNLGS NLLTGIVPPA IGKLSELVVL
201: DLSENSYLVS EIPSFLGKLD KLEQLLLHRS GFHGEIPTSF VGLTSLRTLD LSLNNLSGEI PRSLGPSLKN LVSLDVSQNK LSGSFPSGIC SGKRLINLSL
301: HSNFFEGSLP NSIGECLSLE RLQVQNNGFS GEFPVVLWKL PRIKIIRADN NRFTGQVPES VSLASALEQV EIVNNSFSGE IPHGLGLVKS LYKFSASQNR
401: FSGELPPNFC DSPVLSIVNI SHNRLLGKIP ELKNCKKLVS LSLAGNAFTG EIPPSLADLH VLTYLDLSDN SLTGLIPQGL QNLKLALFNV SFNGLSGEVP
501: HSLVSGLPAS FLQGNPELCG PGLPNSCSSD RSNFHKKGGK ALVLSLICLA LAIATFLAVL YRYSRKKVQF KSTWRSEFYY PFKLTEHELM KVVNESCPSG
601: SEVYVLSLSS GELLAVKKLV NSKNISSKSL KAQVRTIAKI RHKNITRILG FCFKDEMIFL IYEFTQNGSL HDMLSRAGDQ LPWSIRLKIA LGVAQALAYI
701: SKDYVPHLLH RNLKSANIFL DKDFEPKLSD FALDHIVGET AFQSLVHANT NSCYTAPENH YSKKATEDMD VYSFGVVLLE LVTGQSAEKA EEGSSGESLD
801: IVKQVRRKIN LTDGAAQVLD QKILSDSCQS DMRKTLDIAL DCTAVAAEKR PSLVKVIKLL EGISSSVSPV SA

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL51]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.