Factsheet for TraesCS6A01G228900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G206000.1	Wheat	plasma membrane	70.9	73.02
TraesCS4A01G489700.1	Wheat	plasma membrane	30.86	68.09
TraesCS4A01G489900.1	Wheat	extracellular, plasma membrane	15.7	65.44
Zm00001d051094_P001	Maize	plasma membrane	31.31	59.97
Zm00001d051096_P001	Maize	cytosol, nucleus, peroxisome	41.27	59.69
Zm00001d051099_P001	Maize	plasma membrane	51.5	58.93
Zm00001d051088_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	32.8	58.4
Zm00001d051093_P001	Maize	plasma membrane	44.89	57.78
Zm00001d051085_P001	Maize	plasma membrane	43.3	57.16
TraesCS1A01G391700.1	Wheat	mitochondrion	28.22	56.94
TraesCS2A01G475400.1	Wheat	cytosol, nucleus, vacuole	16.14	55.96
Os02t0614966-00	Rice	extracellular	14.64	55.33
TraesCS2A01G359700.1	Wheat	plasma membrane	48.68	54.71
TraesCS1A01G337300.1	Wheat	plasma membrane	46.74	52.06
TraesCS1A01G391800.1	Wheat	mitochondrion	21.96	50.92
TraesCS4A01G310800.1	Wheat	plastid	15.26	47.14
TraesCS4A01G232200.1	Wheat	cytosol, plastid	31.39	46.9
KXG21282	Sorghum	extracellular, vacuole	21.08	46.86
TraesCS3A01G060200.1	Wheat	plasma membrane	37.39	46.8
TraesCS4A01G206000.1	Wheat	plasma membrane	41.71	46.69
TraesCS3A01G060900.1	Wheat	plasma membrane, plastid	14.37	46.57
TraesCS6A01G401200.1	Wheat	extracellular, mitochondrion, plastid, vacuole	15.52	46.44
TraesCS5A01G317700.1	Wheat	extracellular	13.58	46.39
TraesCS2A01G496000.1	Wheat	plasma membrane	36.68	46.33
TraesCS3A01G060100.1	Wheat	plasma membrane	40.56	45.5
TraesCS3A01G060000.1	Wheat	cytosol, peroxisome, plastid	34.04	45.47
TraesCS7A01G018700.1	Wheat	plastid	19.22	45.23
TraesCS7A01G508200.1	Wheat	extracellular	14.11	44.94
TraesCS5A01G474400.1	Wheat	cytosol	21.78	44.91
TraesCS3A01G061000.1	Wheat	cytosol	19.75	44.62
TraesCS3A01G007200.1	Wheat	plasma membrane	39.59	44.06
TraesCS6A01G419000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	20.28	43.81
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	8.73	42.31
CDX71113	Canola	plasma membrane	23.99	39.65
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	35.8	39.65
PGSC0003DMT400031158	Potato	plasma membrane	33.51	39.62
CDY00454	Canola	plasma membrane	34.04	39.11
Bra005562.1-P	Field mustard	plasma membrane	35.36	39.08
Bra018128.1-P	Field mustard	plasma membrane	35.71	38.94
Bra015204.1-P	Field mustard	plasma membrane	34.57	38.89
AT3G47090.1	Thale cress	plasma membrane	34.48	38.75
Bra014313.1-P	Field mustard	cytosol	24.43	38.31
KRH73172	Soybean	extracellular, vacuole	11.2	38.25
CDY49183	Canola	extracellular, plasma membrane	23.02	37.94
CDY65706	Canola	extracellular, plasma membrane	22.75	37.5
CDY60624	Canola	plasma membrane	22.4	36.81
KRH76431	Soybean	plasma membrane	24.96	36.61
Bra029191.1-P	Field mustard	plasma membrane	30.95	36.15
TraesCS1A01G169700.1	Wheat	plasma membrane, vacuole	22.05	36.08
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	16.67	35.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00365	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G228900	EnsemblPlants:TraesCS6A01G228900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:431220581..431224327

Molecular Weight (calculated)

123803.0 Da

IEP (calculated)

7.127

GRAVY (calculated)

-0.030

Length

1134 amino acids

Sequence
(BLAST)

0001: MSQLSIQRTR TRTLHSSHTA TRQNQSRNGS RTVLLPRSSR GDQGLMRSPK QPAKLVMLLL LALLLLCNGV GNVHCTRIHE NSVDLHALLD FKQGINNPQE
0101: ALSNWSTTTH FCRWNGVICT TTRPFRVLSL ILTELDLAGQ ISSSLGNLTF LETLDLSYNN FVGPLPVLGH LQQLQTLSLN NNRLNGMIPD SLTNCSSLDT
0201: LDLSVNFLVG PIPPNLDLLS NLTYLDLSSN MLVGQIPPKL VSLSKLVTLD LSHNMLVGPI PPNLDLLSNL TYLDLSRNLL VGQIPLKIVS LPKLATLDLS
0301: TNMLVGQIPP KLGFVSSLEY FSLASNKLEG SIPNELGQLP SLQYLLLGEN NLSGEFPHSI LNRNLSVSLL YLGLELNMLG KVLPPNIGDL RGLVHLTMSG
0401: NMFEGHIPAS LGNATGLKVI DLSANNFTGQ IPNSFGKLSN LTNLNLQYNQ LETRDWEFFN ALTNCRSLNS LSLGFNQLQG SIPQSVGNLS NKLEKLTLTQ
0501: NSLSGQVPQS IGNLSALNQL ALGINNLSGT IEGWIGNLKG LEGLTLRSNR FTGQIPPSIS NLTRLINLYL YDNQFEGLIP PSLGNLPLTQ LVLSSNNLYG
0601: YIPPSLGSLQ QLTSLNLSHN NLQGEIPQIS ALKQLTTLDL SSNKLTGSIP DSLGQCYGLR SLQMDQNFLS GNIPIAFGKL LSLSILNLSH NNLSGTIPSA
0701: LNKLEFLNHL DLSYNHLEGK IPRDGAFENA TAVSLENNWG LCGGAVDLHM ASCTTISKKE EERRYRLIKV LIPIFGFLSL VLLIYFVLLE KKMRRANDTS
0801: ASLGENFLKV SYADLAQATS NFSESNLVGR GGYGSVYRGK LKDSKVEVAV KVFDLEMHGA ERSFLKECEA LRSIQHRNLL PIITACSTVD NTGNVFKALV
0901: YEFMPNGNLD TWLHHREDGK AHKHLSLAQR LDIAVNMADA LDYLHHDCGR PTIHCDLKPS NILLDDDMTA LLGDFGIASF YQDSRSTSPG SVSSSSVGMK
1001: GTIGYIGPEY AGGGRHASTC GDVYGFGIIL LEMMTGKRPT DPLFKDGVSI VDFVESNFPH EIVRVIDANL SEECKDIAQS KKISENSVHQ CLLSVLQLAL
1101: SCTHPVPGER MNMKVVASKM HAIKTSYGGC NAQE

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.