Factsheet for TraesCS3A01G061000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G060200.1	Wheat	plasma membrane	69.32	38.41
EES08077	Sorghum	plasma membrane, vacuole	38.05	37.3
TraesCS1A01G391800.1	Wheat	mitochondrion	34.46	35.38
TraesCS4A01G489700.1	Wheat	plasma membrane	36.06	35.21
TraesCS5A01G317700.1	Wheat	extracellular	22.71	34.34
TraesCS3A01G060100.1	Wheat	plasma membrane	69.12	34.32
KRH73172	Soybean	extracellular, vacuole	22.51	34.04
TraesCS6A01G401200.1	Wheat	extracellular, mitochondrion, plastid, vacuole	25.3	33.51
TraesCS2A01G475400.1	Wheat	cytosol, nucleus, vacuole	20.92	32.11
TraesCS7A01G508200.1	Wheat	extracellular	22.51	31.74
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	14.34	30.77
TraesCS3A01G060000.1	Wheat	cytosol, peroxisome, plastid	51.99	30.74
TraesCS4A01G206000.1	Wheat	plasma membrane	61.35	30.4
TraesCS7A01G018700.1	Wheat	plastid	28.69	29.88
TraesCS2A01G496000.1	Wheat	plasma membrane	52.79	29.51
TraesCS4A01G489900.1	Wheat	extracellular, plasma membrane	15.14	27.94
CDY60624	Canola	plasma membrane	38.25	27.83
TraesCS3A01G007200.1	Wheat	plasma membrane	56.37	27.77
Bra014313.1-P	Field mustard	cytosol	39.24	27.25
TraesCS1A01G169700.1	Wheat	plasma membrane, vacuole	36.85	26.7
CDY65706	Canola	extracellular, plasma membrane	35.46	25.87
CDY49183	Canola	extracellular, plasma membrane	35.06	25.58
KRH76431	Soybean	plasma membrane	39.24	25.49
TraesCS4A01G232200.1	Wheat	cytosol, plastid	34.26	22.66
TraesCS6A01G419000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	23.11	22.1
TraesCS2A01G359700.1	Wheat	plasma membrane	43.23	21.51
Bra029191.1-P	Field mustard	plasma membrane	40.04	20.7
TraesCS6A01G228900.1	Wheat	plasma membrane	44.62	19.75
Bra005562.1-P	Field mustard	plasma membrane	39.24	19.2
TraesCS1A01G337300.1	Wheat	plasma membrane	38.84	19.16
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	39.04	19.14
PGSC0003DMT400031158	Potato	plasma membrane	36.26	18.98
Bra018128.1-P	Field mustard	plasma membrane	39.24	18.94
AT3G47090.1	Thale cress	plasma membrane	37.25	18.53
CDY00454	Canola	plasma membrane	36.06	18.34
Bra015204.1-P	Field mustard	plasma membrane	36.06	17.96
CDX71113	Canola	plasma membrane	21.31	15.6
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	14.54	13.59
TraesCS5A01G474400.1	Wheat	cytosol	11.95	10.91
TraesCS1A01G391700.1	Wheat	mitochondrion	8.17	7.3
TraesCS3A01G060900.1	Wheat	plasma membrane, plastid	0.4	0.57
TraesCS4A01G310800.1	Wheat	plastid	0.4	0.54
TraesCSU01G084200.1	Wheat	plasma membrane, plastid	0.4	0.52

Protein Annotations

EnsemblPlants:TraesCS3A01G061000.1	EnsemblPlantsGene:TraesCS3A01G061000	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	ncoils:Coil	PANTHER:PTHR43887
PANTHER:PTHR43887:SF9	PFAM:PF13855	SEG:seg	SUPFAM:SSF52058	MapMan:35.1	:

Description

No Description!

Coordinates

chr3A:-:36480921..36482808

Molecular Weight (calculated)

51827.3 Da

IEP (calculated)

6.947

GRAVY (calculated)

0.030

Length

502 amino acids

Sequence
(BLAST)

001: MSWSDTTHFC NWEGVLCRMK TPRRVTSLNL TSQGLVGHIS PLLGNLTFLQ SLILTDNTLT GEIPPSLGHL RRLQTLRLNN NTLQGRLPSF ANCSDLRVLD
101: VSVNNLVGRI PVDLPPRHLQ VLQVSANNLT GTIPTSLGNI TKLTTISFSF NHITGYIPNE LAHLSNLQYM YASVNQLVGR FPQAILNLST LVGLDIVLNG
201: LSGEVPPNLC TSLPNLQILV LGGNFFRGHI PSSFTNASSL NDIDLSGNNF TGSVPTTIGK LTKLSWLNLE RNQLQAHNKQ EWGFLDSLGN CTELQMFSMS
301: WNRLSGDVPS SLGNLSSQLQ RLYMAQNQLS GDFPSGIANL RNLIXXXXXX XXXXXXXXXX XXXXXXXXXX XXHTNSFTGV IPSSLSNLSQ LGGLYMFSNQ
401: LTAHIPPSFG NFSMLQYLDI FNNHLHGGVP MEIFRIPTIF EIVLSFNNLD GKVPSNIGNA KQLVNLVLSS NKLSGDIPST LGNCESLEDV ELDSNIFSLS
501: TL

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.