Factsheet for TraesCS1A01G391700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G086400.1	Barley	cytosol, nucleus, peroxisome	91.81	63.24
TraesCS4A01G310800.1	Wheat	plastid	30.61	46.87
TraesCS3A01G060900.1	Wheat	plasma membrane, plastid	29.18	46.86
TraesCS5A01G474400.1	Wheat	cytosol	43.95	44.91
TraesCS4A01G232200.1	Wheat	cytosol, plastid	47.69	35.31
TraesCS6A01G419000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.21	34.48
TraesCS1A01G337300.1	Wheat	plasma membrane	59.96	33.1
TraesCS2A01G359700.1	Wheat	plasma membrane	56.94	31.71
TraesCS3A01G060000.1	Wheat	cytosol, peroxisome, plastid	46.44	30.74
TraesCS6A01G228900.1	Wheat	plasma membrane	56.94	28.22
CDX71113	Canola	plasma membrane	33.27	27.26
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	24.38	25.51
TraesCS3A01G007200.1	Wheat	plasma membrane	46.09	25.42
TraesCS4A01G206000.1	Wheat	plasma membrane	45.37	25.17
TraesCS3A01G060100.1	Wheat	plasma membrane	44.84	24.93
TraesCS2A01G496000.1	Wheat	plasma membrane	38.97	24.39
TraesCS3A01G060200.1	Wheat	plasma membrane	36.83	22.85
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	38.61	21.19
CDY00454	Canola	plasma membrane	37.01	21.07
PGSC0003DMT400031158	Potato	plasma membrane	35.94	21.06
Bra015204.1-P	Field mustard	plasma membrane	37.01	20.63
TraesCS2A01G475400.1	Wheat	cytosol, nucleus, vacuole	11.92	20.49
AT3G47090.1	Thale cress	plasma membrane	36.65	20.42
Bra005562.1-P	Field mustard	plasma membrane	36.12	19.79
Bra018128.1-P	Field mustard	plasma membrane	36.48	19.71
Bra029191.1-P	Field mustard	plasma membrane	31.14	18.02
KRH76431	Soybean	plasma membrane	19.57	14.23
CDY49183	Canola	extracellular, plasma membrane	14.95	12.21
CDY65706	Canola	extracellular, plasma membrane	14.23	11.63
Bra014313.1-P	Field mustard	cytosol	14.59	11.34
TraesCS1A01G169700.1	Wheat	plasma membrane, vacuole	11.92	9.67
CDY60624	Canola	plasma membrane	11.74	9.57
TraesCS3A01G061000.1	Wheat	cytosol	7.3	8.17
TraesCS7A01G018700.1	Wheat	plastid	4.09	4.77
TraesCS5A01G317700.1	Wheat	extracellular	0.18	0.3
TraesCS7A01G508200.1	Wheat	extracellular	0.18	0.28
TraesCS4A01G489700.1	Wheat	plasma membrane	0.0	0.0
TraesCS6A01G401200.1	Wheat	extracellular, mitochondrion, plastid, vacuole	0.0	0.0
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	0.0	0.0
TraesCS4A01G489900.1	Wheat	extracellular, plasma membrane	0.0	0.0
KRH73172	Soybean	extracellular, vacuole	0.0	0.0
TraesCS1A01G391800.1	Wheat	mitochondrion	0.0	0.0
TraesCS1D01G399900.1	Wheat	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR43887	PANTHER:PTHR43887:SF32	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G391700	EnsemblPlants:TraesCS1A01G391700.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:558538124..558541296

Molecular Weight (calculated)

62240.7 Da

IEP (calculated)

7.123

GRAVY (calculated)

-0.033

Length

562 amino acids

Sequence
(BLAST)

001: MLTRLNLSYN NLQGNIPREI FHTGSTLTIC ALSYNNLQGT IPTEFSNLRQ LVELYLSSNK LSGEIPSALG ECQELQILQM DQNILTGDIP ESLSNLKSLV
101: VLNFSHNSLS GSIPTSISDL KYLNQLDLSY NHIHGEVPRN GVFENVMAVS LDGNSGLCGG AVDLRMPTCS AISQRKGRLY YLVRVCIPLV GFTSLVLFAY
201: FVLLESKTPR RTYLLLLSFG KHFPRVTYRD LAQATQSFSE SNLVGRGSYG SVYRGKLTQA KIQVAIKVFD LDVRYADKSF ISECEVLRSI RHRNLVSILT
301: ACSTIDNDGN TFKALIYEFM PNGNLDTWLH TKSAGEGPRI LSLGQRISIA VNIADALAYL HHDITRSIVH CDLKPSNILL DTDMNAYLGD FGIANLVRNS
401: KSTSVGHSSS ASTSDGSIGL KGTIGYIAPE YAQTGQASTY GDIYSFGVVL LEMLIDKRPT DPIFDNELNI VNFAERNSPD QILHIIDDHL QEECKGFIRA
501: TAEAGNVVYQ CLVSLVQVAL SCTRLFPRER MNMREVAMKL QAARTSYICW SKQTRASYAT LE

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.