Factsheet for TraesCS1D01G399900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, extracellular, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G391800.1	Wheat	mitochondrion	75.73	79.14
TraesCS6D01G385000.1	Wheat	mitochondrion	15.26	59.54
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	44.23	59.47
TraesCS6D01G385200.1	Wheat	mitochondrion	43.25	56.81
TraesCS5D01G324100.1	Wheat	extracellular	35.42	54.52
TraesCS7D01G496400.1	Wheat	extracellular	35.23	50.56
TraesCS6D01G205800.1	Wheat	extracellular	12.72	48.51
TraesCS3D01G463800.1	Wheat	extracellular, plasma membrane	45.79	45.35
TraesCS7D01G006200.1	Wheat	plasma membrane	45.6	41.68
KRH73172	Soybean	extracellular, vacuole	25.64	39.46
TraesCS4D01G106600.1	Wheat	vacuole	38.75	30.46
Bra014313.1-P	Field mustard	cytosol	36.01	25.45
CDY60624	Canola	plasma membrane	33.46	24.78
CDY49183	Canola	extracellular, plasma membrane	32.88	24.42
CDY65706	Canola	extracellular, plasma membrane	32.68	24.27
HORVU1Hr1G086400.1	Barley	cytosol, nucleus, peroxisome	38.75	24.26
TraesCS2D01G475300.1	Wheat	plasma membrane	44.42	23.74
TraesCS7D01G144900.1	Wheat	plasma membrane	46.77	23.64
TraesCS6D01G206100.1	Wheat	plasma membrane	45.99	22.79
KRH76431	Soybean	plasma membrane	33.46	22.12
TraesCS6D01G206000.1	Wheat	plasma membrane	47.16	21.89
TraesCS4D01G107000.1	Wheat	plasma membrane	42.27	21.3
TraesCS4D01G003300.1	Wheat	plasma membrane	41.1	21.3
TraesCS4D01G106900.1	Wheat	plasma membrane	41.68	20.99
TraesCS3D01G060300.1	Wheat	plasma membrane	40.12	20.22
PGSC0003DMT400031158	Potato	plasma membrane	34.83	18.56
TraesCS2D01G067800.1	Wheat	plasma membrane, plastid	37.38	18.45
Bra018128.1-P	Field mustard	plasma membrane	36.99	18.17
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	36.4	18.16
AT3G47090.1	Thale cress	plasma membrane	35.62	18.04
Bra029191.1-P	Field mustard	plasma membrane	34.05	17.92
Bra015204.1-P	Field mustard	plasma membrane	35.03	17.76
CDY00454	Canola	plasma membrane	34.05	17.63
TraesCS6D01G205900.1	Wheat	plasma membrane	27.98	17.29
Bra005562.1-P	Field mustard	plasma membrane	34.44	17.15
TraesCS4D01G081700.1	Wheat	cytosol, nucleus, peroxisome	28.18	17.0
TraesCS2D01G013100.1	Wheat	plasma membrane	32.68	16.25
TraesCS6D01G000800.2	Wheat	mitochondrion, plastid	27.01	15.81
TraesCS3D01G060500.1	Wheat	mitochondrion, plasma membrane	25.05	14.25
CDX71113	Canola	plasma membrane	18.2	13.56
TraesCS2D01G474300.1	Wheat	plasma membrane	19.37	13.15
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	9.0	8.57
TraesCS3D01G003700.1	Wheat	cytosol	10.57	7.99
TraesCS3D01G060000.1	Wheat	cytosol	0.0	0.0
TraesCS1A01G391700.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1D01G399900.1	EnsemblPlantsGene:TraesCS1D01G399900	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	SEG:seg	SUPFAM:SSF52058
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:466386615..466388390

Molecular Weight (calculated)

54775.0 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.043

Length

511 amino acids

Sequence
(BLAST)

001: MGPQPAAHPA SNLTLPSSHT TAKPGETMHQ ERPPFCAIRT SKGNEGLVSP NRPARRAMIL LLALLLISDG VGTAHCSTVS GNSTDMLSLL DFKRDITNDP
101: RQALGSWNAS IPHCEWKGVN CSLTHPGRVT VLNLTEQGLS GSISPSLGNL TFLETLDLST NSFTGELPPL GRLHRLQQLL LSKNSLQGII PATLTNCSNL
201: SYLDLYGNFL TGEIPLSIGL LSNLLWLQLS ENNITGTIPP SLKNISQLEA IDLADNQLMG SIPHEIGQFP SMMGLVLGGN MLSGRIPTTV LNQSYLQILD
301: LSTNMIGSTL PSDFGDTPPS LTLLYLDYNM FEGYIPASLG NTSGLSVLDL SYNKLTGQVP SSLGRLGMLN NLNLQNNKLE AKDIQSWEFI DTLSNCRSLQ
401: VLALGKNQLK GAIPSSIGNL SSKLQGLGLD ANDLSGTIPT NIGNLSGLTT LALRENKLHG SIEGWVRNLR NLTVLALDGN NFTGPIPTSI SNLARLKKLY
501: LANNEFEGPI P

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.