Factsheet for TraesCS6D01G000800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G060000.1	Wheat	cytosol	19.59	75.33
TraesCS5A01G474400.1	Wheat	cytosol	46.62	74.0
TraesCS3B01G072900.1	Wheat	mitochondrion	33.1	73.72
TraesCS3B01G073100.1	Wheat	mitochondrion	32.99	73.47
TraesCSU01G173400.2	Wheat	extracellular, plasma membrane	48.34	73.39
TraesCSU01G167400.4	Wheat	extracellular, plasma membrane	48.34	73.39
TraesCS3D01G060500.1	Wheat	mitochondrion, plasma membrane	70.9	68.93
TraesCS4D01G003300.1	Wheat	plasma membrane	73.31	64.91
TraesCS3D01G060300.1	Wheat	plasma membrane	74.23	63.91
TraesCS3D01G003700.1	Wheat	cytosol	46.62	60.21
TraesCS4D01G081700.1	Wheat	cytosol, nucleus, peroxisome	54.07	55.73
TraesCS4D01G107000.1	Wheat	plasma membrane	63.0	54.24
TraesCS4D01G106900.1	Wheat	plasma membrane	62.89	54.09
TraesCS4D01G106600.1	Wheat	vacuole	33.56	45.08
TraesCS6D01G205900.1	Wheat	plasma membrane	41.92	44.26
TraesCS2D01G474300.1	Wheat	plasma membrane	35.97	41.7
TraesCS7D01G144900.1	Wheat	plasma membrane	46.51	40.16
TraesCS2D01G475300.1	Wheat	plasma membrane	39.75	36.3
EES08077	Sorghum	plasma membrane, vacuole	21.08	35.94
TraesCS6D01G206100.1	Wheat	plasma membrane	42.04	35.6
Bra018128.1-P	Field mustard	plasma membrane	41.81	35.1
TraesCS6D01G206000.1	Wheat	plasma membrane	43.99	34.88
AT3G47090.1	Thale cress	plasma membrane	40.09	34.69
PGSC0003DMT400031158	Potato	plasma membrane	38.03	34.62
CDY00454	Canola	plasma membrane	39.06	34.55
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	39.75	33.89
Bra015204.1-P	Field mustard	plasma membrane	39.06	33.83
Bra005562.1-P	Field mustard	plasma membrane	39.75	33.82
CDX71113	Canola	plasma membrane	26.57	33.82
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	20.73	33.71
Bra029191.1-P	Field mustard	plasma membrane	37.46	33.68
KRH76431	Soybean	plasma membrane	29.21	32.99
Bra014313.1-P	Field mustard	cytosol	26.57	32.09
TraesCS2D01G067800.1	Wheat	plasma membrane, plastid	38.03	32.08
TraesCS3D01G463800.1	Wheat	extracellular, plasma membrane	18.9	31.98
CDY65706	Canola	extracellular, plasma membrane	24.05	30.52
TraesCS2D01G013100.1	Wheat	plasma membrane	35.85	30.45
CDY49183	Canola	extracellular, plasma membrane	23.94	30.38
CDY60624	Canola	plasma membrane	23.14	29.28
TraesCS1D01G399900.1	Wheat	plastid	15.81	27.01
KRH73172	Soybean	extracellular, vacuole	10.19	26.81
TraesCS5D01G324100.1	Wheat	extracellular	9.85	25.9
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	11.0	25.26
TraesCS7D01G496400.1	Wheat	extracellular	10.08	24.72
TraesCS7D01G006200.1	Wheat	plasma membrane	15.81	24.69
TraesCS6D01G385200.1	Wheat	mitochondrion	10.65	23.91
TraesCS6D01G205800.1	Wheat	extracellular	0.11	0.75
TraesCS6D01G385000.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF12799	PFAM:PF13855
ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR43887	PANTHER:PTHR43887:SF9	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS6D01G000800	EnsemblPlants:TraesCS6D01G000800.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:+:387724..390437

Molecular Weight (calculated)

94758.9 Da

IEP (calculated)

5.371

GRAVY (calculated)

0.075

Length

873 amino acids

Sequence
(BLAST)

001: MLQGRIPSFA NCSKLRVLDV SYNNLVGQFP TELPPVLQVL RVGTNNLTGT IPASLVNITT LTTISCLNNQ IKGNIPSEFA DLPSLQYLYA GGNKLAGSFP
101: QAILNLSTLI ELDLGLNGLS GDLPPNLCTA LHNLQTLFLG GNIFLGGHIP SSLSSASNLY EVDFSGNNFT GLVPTTIGKL TQLSSLNLEK NQLQAHSREE
201: WEFLDSLGNS TDLQMFSVSR NRLSGHVPNS LGNLSNQLLE IYLAENQLSG DFPSGIANLR NLFILTLGMN QFTGVVTEWI GSVKILQQLV LEANFFTGVI
301: PSSLSNLSQL GELYLSSNHF IGHIPASFGN FSTLQNLDIS NNNLHGRVPL EIFKIPTIFQ IDFSFNNLDG QLPTDIGNAK QLVHLVLSSN KLSGDIPKTL
401: GDCESLEDIE LDSNIFGGSI PSSLDHITSL KFLNCSSNNL TGSIPLSLGN LQHLEKLDLS FNHLQGEVPA KGIFKNATAI RIEGNQGLCG GPSELLMQAC
501: VVTPSNSTRN NESLVLKVVI PIISMVLLGM VIFGILIWRG KHKSKSISVP SFATKFPKIS FSDLARATEG FSTCNLIGCG RYSSVYRGNL VEDEIEVAIK
601: VFNLETRGAH KSFIAECNVL RNVRHRNLVP ILTACSSIDS TGNDFKALVY EFMPRGDLHN LLYSTIDYEG SSDLDLLTMS QRMCIVVDVA DAMEYLHQNN
701: QGTAVHCDLK PSNILLDDNM TAHVGDFGLV RFKVGSATSS LANPSSSSVG LMGTIGYAAP EYAGGGQVST AADVYSFGVV LLEIFLRRRP TDDMFKDGLS
801: IVKLTEISFP DRVMEIVDPQ LVQELELCQE TPTALKEKGV RSLLSMLNVG LSCTKPSPHE RTNMHEVVAK LPE

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.