Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G385000.1 | Wheat | mitochondrion | 35.82 | 36.64 |
| Os02t0614966-00 | Rice | extracellular | 55.97 | 25.0 |
| TraesCS5D01G324100.1 | Wheat | extracellular | 43.28 | 17.47 |
| TraesCS7D01G496400.1 | Wheat | extracellular | 45.52 | 17.13 |
| TraesCS6D01G385100.1 | Wheat | extracellular, mitochondrion, plastid, vacuole | 46.27 | 16.32 |
| TraesCS7D01G006200.1 | Wheat | plasma membrane | 64.18 | 15.38 |
| TraesCS6D01G385200.1 | Wheat | mitochondrion | 41.79 | 14.4 |
| Zm00001d051094_P001 | Maize | plasma membrane | 59.7 | 13.51 |
| KXG21282 | Sorghum | extracellular, vacuole | 49.25 | 12.94 |
| TraesCS1D01G399900.1 | Wheat | plastid | 48.51 | 12.72 |
| Zm00001d051088_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 58.96 | 12.4 |
| TraesCS3D01G463800.1 | Wheat | extracellular, plasma membrane | 44.03 | 11.43 |
| TraesCS6B01G252800.1 | Wheat | plasma membrane | 79.1 | 9.87 |
| TraesCS6D01G206000.1 | Wheat | plasma membrane | 76.12 | 9.26 |
| Zm00001d051093_P001 | Maize | plasma membrane | 56.72 | 8.63 |
| KRH73172 | Soybean | extracellular, vacuole | 20.9 | 8.43 |
| Zm00001d051099_P001 | Maize | plasma membrane | 60.45 | 8.17 |
| TraesCS4D01G106600.1 | Wheat | vacuole | 39.55 | 8.15 |
| Zm00001d051085_P001 | Maize | plasma membrane | 52.24 | 8.15 |
| TraesCS6D01G206100.1 | Wheat | plasma membrane | 48.51 | 6.3 |
| TraesCS2D01G475300.1 | Wheat | plasma membrane | 42.54 | 5.96 |
| CDY60624 | Canola | plasma membrane | 30.6 | 5.94 |
| CDX71113 | Canola | plasma membrane | 29.85 | 5.83 |
| KRH76431 | Soybean | plasma membrane | 33.58 | 5.82 |
| CDY65706 | Canola | extracellular, plasma membrane | 29.85 | 5.81 |
| CDY49183 | Canola | extracellular, plasma membrane | 29.85 | 5.81 |
| Bra014313.1-P | Field mustard | cytosol | 31.34 | 5.81 |
| TraesCS7D01G144900.1 | Wheat | plasma membrane | 42.54 | 5.64 |
| TraesCS4D01G003300.1 | Wheat | plasma membrane | 41.04 | 5.58 |
| TraesCS3D01G060300.1 | Wheat | plasma membrane | 41.79 | 5.52 |
| TraesCS4D01G107000.1 | Wheat | plasma membrane | 41.04 | 5.42 |
| TraesCS4D01G106900.1 | Wheat | plasma membrane | 38.81 | 5.12 |
| TraesCS2D01G067800.1 | Wheat | plasma membrane, plastid | 37.31 | 4.83 |
| AT3G47090.1 | Thale cress | plasma membrane | 33.58 | 4.46 |
| Bra018128.1-P | Field mustard | plasma membrane | 34.33 | 4.42 |
| PGSC0003DMT400013987 | Potato | cytosol, nucleus, plasma membrane | 31.34 | 4.1 |
| Bra005562.1-P | Field mustard | plasma membrane | 31.34 | 4.09 |
| Bra015204.1-P | Field mustard | plasma membrane | 30.6 | 4.07 |
| PGSC0003DMT400031158 | Potato | plasma membrane | 29.1 | 4.07 |
| Bra029191.1-P | Field mustard | plasma membrane | 27.61 | 3.81 |
| CDY00454 | Canola | plasma membrane | 26.12 | 3.55 |
| TraesCS2D01G013100.1 | Wheat | plasma membrane | 25.37 | 3.31 |
| VIT_18s0001g15800.t01 | Wine grape | cytosol, peroxisome | 4.48 | 1.12 |
| TraesCS3D01G060500.1 | Wheat | mitochondrion, plasma membrane | 7.46 | 1.11 |
| TraesCS4D01G081700.1 | Wheat | cytosol, nucleus, peroxisome | 5.97 | 0.94 |
| TraesCS3D01G003700.1 | Wheat | cytosol | 0.75 | 0.15 |
| TraesCS2D01G474300.1 | Wheat | plasma membrane | 0.75 | 0.13 |
| Zm00001d051096_P001 | Maize | cytosol, nucleus, peroxisome | 0.75 | 0.13 |
| TraesCS6D01G205900.1 | Wheat | plasma membrane | 0.75 | 0.12 |
| TraesCS6D01G000800.2 | Wheat | mitochondrion, plastid | 0.75 | 0.11 |
| TraesCS3D01G060000.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G205800.1 | EnsemblPlantsGene:TraesCS6D01G205800 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| PANTHER:PTHR43887 | PANTHER:PTHR43887:SF32 | PFAM:PF08263 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:291783684..291784088
Molecular Weight (calculated)
14801.0 Da
IEP (calculated)
8.357
GRAVY (calculated)
0.125
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSPKQPAKL TMLLLLALLL FCYGVGNVHC STIHENRVDL QALLDFQQGI ASDPQGALSN WNTTTHFCHW NGVNCTTTPP FRVTQLKLSG WNLAGQITSS
101: LGNLTFLAYL DLSGNNFVGP LPVIGHLQQL RHFL
101: LGNLTFLAYL DLSGNNFVGP LPVIGHLQQL RHFL
001: MKISLFFAFN ALMLLQVCIL VFAQARFSNE TDMQALLEFK SQVTENKREV LASWNHSFPL CHWIGITCGR KQERVTSLDL GGFKLSGSIS PSIGNLSFLR
101: SLNLGDNSFQ SNIPQEFEGS VPTKGVFQNG TTVSVFGNEN LCGGVIEMQL KPCIESPRQK KPFSLGEKVA VGVGVALLFL FIIVASLSWF KKKNDKISYE
201: ELYNATSGFS SSNLIGSGNF SDVFKGLLGL EEKLVAVKVL NLLKHGATKS FIAECESFKG IRHRNLAKLI TVCSSLDSQG NDFRALVYEF MPKGSLDMWL
301: QPEDLESANN HSRSLTFAEK VNIAIDVASA LEYLHVYCHD PVAHCDIKPS NVLLDDDLTA HVSDFGLARL LYNFDEKTFL NQFSSAGVRG TIGYAAPEYG
401: MGSKPSIQGD VYSFGVLLLE MFTGKKPTDN SFGGGYNLHG YTKSVLSCST SRGGRTMVDE WLRLVLEVGI KCSEEYPRDR MGMAEAVREL VSIKSKFFTS
501: SR
101: SLNLGDNSFQ SNIPQEFEGS VPTKGVFQNG TTVSVFGNEN LCGGVIEMQL KPCIESPRQK KPFSLGEKVA VGVGVALLFL FIIVASLSWF KKKNDKISYE
201: ELYNATSGFS SSNLIGSGNF SDVFKGLLGL EEKLVAVKVL NLLKHGATKS FIAECESFKG IRHRNLAKLI TVCSSLDSQG NDFRALVYEF MPKGSLDMWL
301: QPEDLESANN HSRSLTFAEK VNIAIDVASA LEYLHVYCHD PVAHCDIKPS NVLLDDDLTA HVSDFGLARL LYNFDEKTFL NQFSSAGVRG TIGYAAPEYG
401: MGSKPSIQGD VYSFGVLLLE MFTGKKPTDN SFGGGYNLHG YTKSVLSCST SRGGRTMVDE WLRLVLEVGI KCSEEYPRDR MGMAEAVREL VSIKSKFFTS
501: SR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4KEF0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.