Factsheet for TraesCS6D01G385100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, vacuole

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plastid, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	96.58	96.58
TraesCS6B01G443100.1	Wheat	vacuole	92.37	96.43
TraesCS6B01G441800.1	Wheat	vacuole	76.84	91.82
HORVU6Hr1G092260.1	Barley	extracellular, vacuole	80.53	87.43
HORVU6Hr1G092210.11	Barley	cytosol, extracellular, golgi, mitochondrion	85.79	86.02
TraesCS6D01G385200.1	Wheat	mitochondrion	86.32	84.32
TraesCS6D01G385000.1	Wheat	mitochondrion	23.95	69.47
TraesCS6D01G205800.1	Wheat	extracellular	16.32	46.27
TraesCS1D01G399900.1	Wheat	plastid	59.47	44.23
TraesCS5D01G324100.1	Wheat	extracellular	37.37	42.77
TraesCS7D01G496400.1	Wheat	extracellular	39.21	41.85
TraesCS3D01G463800.1	Wheat	extracellular, plasma membrane	45.0	33.14
TraesCS7D01G006200.1	Wheat	plasma membrane	45.0	30.59
KRH73172	Soybean	extracellular, vacuole	25.53	29.22
TraesCS4D01G106600.1	Wheat	vacuole	39.21	22.92
CDY60624	Canola	plasma membrane	35.0	19.28
CDY65706	Canola	extracellular, plasma membrane	34.74	19.19
CDY49183	Canola	extracellular, plasma membrane	34.74	19.19
Bra014313.1-P	Field mustard	cytosol	35.53	18.67
TraesCS2D01G475300.1	Wheat	plasma membrane	45.79	18.2
TraesCS7D01G144900.1	Wheat	plasma membrane	45.53	17.11
KRH76431	Soybean	plasma membrane	34.47	16.95
TraesCS6D01G206100.1	Wheat	plasma membrane	43.95	16.2
TraesCS6D01G206000.1	Wheat	plasma membrane	46.32	15.99
TraesCS4D01G106900.1	Wheat	plasma membrane	41.32	15.47
TraesCS4D01G107000.1	Wheat	plasma membrane	40.79	15.29
TraesCS4D01G003300.1	Wheat	plasma membrane	37.37	14.4
TraesCS3D01G060300.1	Wheat	plasma membrane	38.42	14.4
Bra015204.1-P	Field mustard	plasma membrane	36.84	13.89
CDY00454	Canola	plasma membrane	35.53	13.68
PGSC0003DMT400031158	Potato	plasma membrane	34.47	13.66
AT3G47090.1	Thale cress	plasma membrane	36.05	13.58
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	36.05	13.38
Bra018128.1-P	Field mustard	plasma membrane	36.32	13.27
Bra029191.1-P	Field mustard	plasma membrane	33.68	13.18
Bra005562.1-P	Field mustard	plasma membrane	35.53	13.16
TraesCS2D01G067800.1	Wheat	plasma membrane, plastid	33.68	12.37
CDX71113	Canola	plasma membrane	22.11	12.24
TraesCS2D01G013100.1	Wheat	plasma membrane	31.84	11.77
TraesCS6D01G000800.2	Wheat	mitochondrion, plastid	25.26	11.0
TraesCS4D01G081700.1	Wheat	cytosol, nucleus, peroxisome	23.68	10.63
TraesCS6D01G205900.1	Wheat	plasma membrane	20.79	9.55
TraesCS3D01G060500.1	Wheat	mitochondrion, plasma membrane	19.74	8.35
TraesCS2D01G474300.1	Wheat	plasma membrane	12.63	6.37
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	7.37	5.21
TraesCS3D01G003700.1	Wheat	cytosol	5.53	3.11
TraesCS3D01G060000.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G385100.1	EnsemblPlantsGene:TraesCS6D01G385100	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	SEG:seg
SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6D:-:463072206..463074128

Molecular Weight (calculated)

42018.9 Da

IEP (calculated)

8.362

GRAVY (calculated)

-0.066

Length

380 amino acids

Sequence
(BLAST)

001: MQERLPFRVI RPSKGDMAIS QAARLATMLM LLPLLLISCG VGSILCSSMT TVHDNSTDMI SLLDFKRAIT NDSRQALTSW HTSFPLCSWE GVHCSSGRVT
101: KLYLRQRGLF GRISSSLGNL TFLRTLDLSK NGFTGELPPL NRLHRLEYLD LGKNSLRGTI PDTLTNCSKL RSLDLSANLL MGEIPLGIGR LSNLRKVWLS
201: SNNLTGTIPP SLRNNSQLED IVLTDNRFMG TIPDEMGSFP SLVYLGLAGN MLSGGIPETL YKYNQSSLQY LYLYSNMLGK TLPSNFGDTF PDLKHLCLDN
301: NNFEGHLPAS LGNISGLRLL NFSSNNFIGQ VPGSFGNLEQ LEYLILQRNN FWGFIPIELG GLKQLTHLDL SDNNLQGGVP

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.