Factsheet for TraesCS6B01G441700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	96.58	96.58
TraesCS6B01G443100.1	Wheat	vacuole	91.58	95.6
TraesCS6B01G441800.1	Wheat	vacuole	76.32	91.19
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	80.0	86.86
HORVU6Hr1G092260.1	Barley	extracellular, vacuole	79.74	86.57
HORVU6Hr1G092210.11	Barley	cytosol, extracellular, golgi, mitochondrion	84.47	84.7
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	85.0	83.03
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	69.74	67.95
TraesCS6B01G441300.1	Wheat	plastid	66.05	64.69
TraesCS6B01G441500.1	Wheat	mitochondrion	70.79	56.63
TraesCS6B01G441000.1	Wheat	plastid	51.32	52.7
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	26.84	47.22
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	29.74	41.85
TraesCS6B01G019400.1	Wheat	mitochondrion	13.42	30.36
KRH73172	Soybean	extracellular, vacuole	25.26	28.92
TraesCS6B01G383900.1	Wheat	vacuole	36.84	27.67
TraesCS3B01G007100.1	Wheat	mitochondrion	18.95	24.74
TraesCS3B01G011400.1	Wheat	mitochondrion	18.95	24.74
CDY60624	Canola	plasma membrane	34.74	19.13
CDY65706	Canola	extracellular, plasma membrane	33.68	18.6
CDY49183	Canola	extracellular, plasma membrane	33.68	18.6
Bra014313.1-P	Field mustard	cytosol	35.0	18.4
TraesCS3B01G043400.1	Wheat	plasma membrane	44.21	18.1
TraesCS2B01G379000.2	Wheat	plasma membrane	46.05	17.34
TraesCS2B01G499100.1	Wheat	plasma membrane	45.53	17.16
TraesCS7B01G045600.1	Wheat	plasma membrane	45.26	17.01
KRH76431	Soybean	plasma membrane	33.95	16.69
TraesCS2B01G524300.1	Wheat	plasma membrane	41.84	15.76
TraesCS6B01G252800.1	Wheat	plasma membrane	43.95	15.55
TraesCS4B01G083700.2	Wheat	plasma membrane	40.79	15.26
TraesCS4B01G109600.1	Wheat	plasma membrane	39.74	14.88
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	18.42	14.46
PGSC0003DMT400031158	Potato	plasma membrane	33.95	13.45
Bra015204.1-P	Field mustard	plasma membrane	35.53	13.39
AT3G47090.1	Thale cress	plasma membrane	35.0	13.18
CDY00454	Canola	plasma membrane	34.21	13.17
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	35.26	13.09
Bra018128.1-P	Field mustard	plasma membrane	35.79	13.08
Bra005562.1-P	Field mustard	plasma membrane	35.26	13.06
Bra029191.1-P	Field mustard	plasma membrane	32.63	12.77
TraesCS7B01G261000.1	Wheat	plasma membrane	34.21	12.67
CDX71113	Canola	plasma membrane	21.32	11.81
TraesCS3B01G072800.1	Wheat	mitochondrion	15.0	6.98
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	7.37	5.21
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	0.26	0.27
TraesCS3B01G073100.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072900.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072700.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G441700.1	EnsemblPlantsGene:TraesCS6B01G441700	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43887	PANTHER:PTHR43887:SF32	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	SEG:seg
SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:-:705757071..705758586

Molecular Weight (calculated)

41904.9 Da

IEP (calculated)

8.135

GRAVY (calculated)

-0.034

Length

380 amino acids

Sequence
(BLAST)

001: MQERLPFHAI RPSKGDMAIS QAARLATMLM LLPLLLISCG IGSILCSSMT TVHDNSTDMI SLLDFKRAIT NDSRQALTSW HTSVPLCSWE GVHCSSGRVT
101: KLYLRQRGLF GRISSSLGNL TFLRTLDLSK NGFTGELPPL NRLHRLEYLD LGKNSLRGTI PDTLTNCSKL RSLDLSANLL MGEIPLGIGR LSNLRKVWLS
201: SNNITGTIPP SLRNNSQLED VVLTDNRFMG IIPDEMGSFP SLVYLGLAGN MLSGGIPETL YKYNQSSLQY LYLYSNMLGK TLPSNFGDTF PDLEHLCLDN
301: NNFEGHLPAS LGNISGLRLL NVSSNNFIGQ VPGSFGNLVQ LEYLILQRNN FWGFLPIELG GLKQLTHLDM SDNNLRGGVP

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.