Factsheet for TraesCS6B01G019300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

plastid 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G441800.1	Wheat	vacuole	44.91	30.5
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	44.44	27.43
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	47.22	26.84
TraesCS6B01G443100.1	Wheat	vacuole	43.98	26.1
TraesCS6B01G441000.1	Wheat	plastid	43.52	25.41
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	45.37	25.19
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	44.91	24.87
TraesCS6B01G441300.1	Wheat	plastid	43.98	24.48
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	26.85	21.48
TraesCS6B01G441500.1	Wheat	mitochondrion	43.98	20.0
TraesCS6B01G383900.1	Wheat	vacuole	32.41	13.83
KRH73172	Soybean	extracellular, vacuole	20.37	13.25
CDY49183	Canola	extracellular, plasma membrane	33.33	10.47
CDY60624	Canola	plasma membrane	33.33	10.43
CDY65706	Canola	extracellular, plasma membrane	32.87	10.32
TraesCS3B01G043400.1	Wheat	plasma membrane	42.13	9.81
TraesCS2B01G499100.1	Wheat	plasma membrane	44.91	9.62
KRH76431	Soybean	plasma membrane	32.87	9.18
TraesCS2B01G524300.1	Wheat	plasma membrane	42.13	9.02
TraesCS4B01G109600.1	Wheat	plasma membrane	42.13	8.97
Bra014313.1-P	Field mustard	cytosol	29.63	8.85
TraesCS2B01G379000.2	Wheat	plasma membrane	41.2	8.82
TraesCS7B01G045600.1	Wheat	plasma membrane	40.74	8.7
CDX71113	Canola	plasma membrane	27.31	8.6
TraesCS4B01G083700.2	Wheat	plasma membrane	39.81	8.46
TraesCS6B01G252800.1	Wheat	plasma membrane	41.2	8.29
TraesCS6B01G019400.1	Wheat	mitochondrion	6.02	7.74
PGSC0003DMT400031158	Potato	plasma membrane	34.26	7.72
Bra005562.1-P	Field mustard	plasma membrane	35.19	7.41
TraesCS7B01G261000.1	Wheat	plasma membrane	33.8	7.12
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	33.33	7.03
Bra029191.1-P	Field mustard	plasma membrane	31.48	7.0
Bra015204.1-P	Field mustard	plasma membrane	32.41	6.94
AT3G47090.1	Thale cress	plasma membrane	31.94	6.84
Bra018128.1-P	Field mustard	plasma membrane	32.87	6.83
CDY00454	Canola	plasma membrane	30.09	6.59
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	8.33	3.72
TraesCS3B01G011400.1	Wheat	mitochondrion	4.63	3.44
TraesCS3B01G007100.1	Wheat	mitochondrion	4.63	3.44
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	8.33	3.35
TraesCS3B01G072800.1	Wheat	mitochondrion	9.26	2.45
TraesCS3B01G073100.1	Wheat	mitochondrion	2.78	1.53
TraesCS3B01G072900.1	Wheat	mitochondrion	2.78	1.53
TraesCS3B01G072700.1	Wheat	plastid	2.31	1.48
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	1.85	1.06

Protein Annotations

EnsemblPlants:TraesCS6B01G019300.1	EnsemblPlantsGene:TraesCS6B01G019300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF08263	PFAM:PF13855	SEG:seg	SUPFAM:SSF52058	MapMan:35.1

Description

No Description!

Coordinates

chr6B:+:11612841..11617152

Molecular Weight (calculated)

23923.0 Da

IEP (calculated)

9.416

GRAVY (calculated)

-0.219

Length

216 amino acids

Sequence
(BLAST)

001: MQERPPFCAI RPIRGNEVNL GAKMAVLLLL SSLLISYGVD SIKCSTVPGN STDMLSLLDF KPAITNDPRQ ALSSWNASIP HCQWEGVNCS LTHKGRVTVL
101: NLTRQNLEGQ IAPSLENLTF LRSLDLRSNG FFGQLPTLNR LHKLQDLILG NNMLRGFNPD AITNCSSLHY LDLSANSLKG SLPTNIGPLA DQKNSDTTER
201: KVCKLTKQII FQHQRK

Best Arabidopsis Sequence Match ( AT3G47570.1 )
(BLAST)

0001: MRLFLLLAFN ALMLLETHGF TDETDRQALL QFKSQVSEDK RVVLSSWNHS FPLCNWKGVT CGRKNKRVTH LELGRLQLGG VISPSIGNLS FLVSLDLYEN
0101: FFGGTIPQEV GQLSRLEYLD MGINYLRGPI PLGLYNCSRL LNLRLDSNRL GGSVPSELGS LTNLVQLNLY GNNMRGKLPT SLGNLTLLEQ LALSHNNLEG
0201: EIPSDVAQLT QIWSLQLVAN NFSGVFPPAL YNLSSLKLLG IGYNHFSGRL RPDLGILLPN LLSFNMGGNY FTGSIPTTLS NISTLERLGM NENNLTGSIP
0301: TFGNVPNLKL LFLHTNSLGS DSSRDLEFLT SLTNCTQLET LGIGRNRLGG DLPISIANLS AKLVTLDLGG TLISGSIPYD IGNLINLQKL ILDQNMLSGP
0401: LPTSLGKLLN LRYLSLFSNR LSGGIPAFIG NMTMLETLDL SNNGFEGIVP TSLGNCSHLL ELWIGDNKLN GTIPLEIMKI QQLLRLDMSG NSLIGSLPQD
0501: IGALQNLGTL SLGDNKLSGK LPQTLGNCLT MESLFLEGNL FYGDIPDLKG LVGVKEVDLS NNDLSGSIPE YFASFSKLEY LNLSFNNLEG KVPVKGIFEN
0601: ATTVSIVGNN DLCGGIMGFQ LKPCLSQAPS VVKKHSSRLK KVVIGVSVGI TLLLLLFMAS VTLIWLRKRK KNKETNNPTP STLEVLHEKI SYGDLRNATN
0701: GFSSSNMVGS GSFGTVYKAL LLTEKKVVAV KVLNMQRRGA MKSFMAECES LKDIRHRNLV KLLTACSSID FQGNEFRALI YEFMPNGSLD MWLHPEEVEE
0801: IHRPSRTLTL LERLNIAIDV ASVLDYLHVH CHEPIAHCDL KPSNVLLDDD LTAHVSDFGL ARLLLKFDEE SFFNQLSSAG VRGTIGYAAP EYGVGGQPSI
0901: NGDVYSFGIL LLEMFTGKRP TNELFGGNFT LNSYTKSALP ERILDIVDES ILHIGLRVGF PVVECLTMVF EVGLRCCEES PMNRLATSIV VKELISIRER
1001: FFKASRTTWR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Source:UniProtKB/Swiss-Prot;Acc:C0LGP4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.