Factsheet for TraesCS6B01G442300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, extracellular

Predictor Summary:

plastid 2
extracellular 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G385000.1	Wheat	mitochondrion	26.67	79.39
TraesCS6B01G441300.1	Wheat	plastid	78.72	79.12
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	43.85	73.08
TraesCS6B01G443100.1	Wheat	vacuole	65.9	70.6
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	63.33	70.57
TraesCS6B01G441000.1	Wheat	plastid	66.92	70.54
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	67.95	69.74
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	67.69	67.87
TraesCS6B01G441800.1	Wheat	vacuole	54.1	66.35
TraesCS6B01G441500.1	Wheat	mitochondrion	71.28	58.53
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	24.87	44.91
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	29.23	42.22
KRH73172	Soybean	extracellular, vacuole	26.67	31.33
TraesCS6B01G019400.1	Wheat	mitochondrion	13.33	30.95
TraesCS6B01G383900.1	Wheat	vacuole	35.38	27.27
TraesCS3B01G007100.1	Wheat	mitochondrion	18.72	25.09
TraesCS3B01G011400.1	Wheat	mitochondrion	18.72	25.09
CDY65706	Canola	extracellular, plasma membrane	35.64	20.2
CDY60624	Canola	plasma membrane	35.38	20.0
CDY49183	Canola	extracellular, plasma membrane	35.13	19.91
Bra014313.1-P	Field mustard	cytosol	36.41	19.64
TraesCS3B01G043400.1	Wheat	plasma membrane	42.82	18.0
TraesCS2B01G379000.2	Wheat	plasma membrane	44.87	17.34
KRH76431	Soybean	plasma membrane	33.59	16.95
TraesCS2B01G499100.1	Wheat	plasma membrane	42.82	16.57
TraesCS7B01G045600.1	Wheat	plasma membrane	42.56	16.42
TraesCS6B01G252800.1	Wheat	plasma membrane	42.31	15.36
TraesCS2B01G524300.1	Wheat	plasma membrane	39.49	15.26
TraesCS4B01G109600.1	Wheat	plasma membrane	39.49	15.17
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	18.46	14.88
TraesCS4B01G083700.2	Wheat	plasma membrane	38.72	14.86
Bra015204.1-P	Field mustard	plasma membrane	37.69	14.58
CDY00454	Canola	plasma membrane	36.41	14.39
Bra018128.1-P	Field mustard	plasma membrane	37.44	14.04
Bra029191.1-P	Field mustard	plasma membrane	34.87	14.01
PGSC0003DMT400031158	Potato	plasma membrane	34.1	13.87
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	35.38	13.48
Bra005562.1-P	Field mustard	plasma membrane	35.38	13.45
AT3G47090.1	Thale cress	plasma membrane	34.36	13.28
TraesCS7B01G261000.1	Wheat	plasma membrane	33.33	12.67
CDX71113	Canola	plasma membrane	21.03	11.95
TraesCS3B01G072800.1	Wheat	mitochondrion	14.62	6.98
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	8.21	5.96
TraesCS3B01G073100.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072900.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072700.1	Wheat	plastid	0.0	0.0
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G442300.1	EnsemblPlantsGene:TraesCS6B01G442300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	SEG:seg	SUPFAM:SSF52058
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:705926280..705927608

Molecular Weight (calculated)

41908.3 Da

IEP (calculated)

5.680

GRAVY (calculated)

-0.064

Length

390 amino acids

Sequence
(BLAST)

001: MEGSGPPFRA IRRSKDQGGL LTCASQPARL APILTLLSLL LISCGVGSIR CSSSTTTIHD NSTDMMSLLD FKRAITNDSS QALRSWHVGV PLCGWKGVVC
101: SGPKHPGGVM GLNLRNLSLS GTISPSLGNL TFLRRLDLFS NGFTGEIPPL SRLQRLEYLD LGYNSLRGII PDNLTNCSNL RDLSLSRNLL IGEVPSGIGR
201: LSNLVSLQLG GNNLTGEIPP SLKNSSQLEN IWLADNKLAG TIPDELGKLP NLSDLDLDAN QLSGGIPETL YKYNRSSLQY LTLGSNMLGK TLPSNFGDTP
301: LNLEALELED NNFEGHLPAS LGNISGLFLL DMSFNNFVGQ VPSSFGNFGT LDYLNLRQNN LSGFIPIELG GLKLLNHLDM SDNSLQSGVP

Best Arabidopsis Sequence Match ( AT1G17230.1 )
(BLAST)

0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I

Arabidopsis Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.