Factsheet for TraesCS6B01G383900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G169700.1	Wheat	plasma membrane, vacuole	67.98	49.64
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	21.74	40.74
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	27.27	39.43
TraesCS6B01G443100.1	Wheat	vacuole	27.27	37.91
HORVU7Hr1G108460.1	Barley	cytosol	24.11	36.86
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	27.67	36.84
TraesCS3B01G011400.1	Wheat	mitochondrion	21.15	36.77
TraesCS3B01G007100.1	Wheat	mitochondrion	21.15	36.77
TraesCS6B01G441800.1	Wheat	vacuole	22.92	36.48
KRH73172	Soybean	extracellular, vacuole	23.72	36.14
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	27.47	35.73
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	27.27	35.38
TraesCS6B01G441300.1	Wheat	plastid	26.48	34.54
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	13.83	32.41
TraesCS6B01G019400.1	Wheat	mitochondrion	10.67	32.14
TraesCS6B01G441500.1	Wheat	mitochondrion	27.87	29.68
TraesCS6B01G441000.1	Wheat	plastid	21.34	29.19
Bra014313.1-P	Field mustard	cytosol	35.38	24.76
CDY60624	Canola	plasma membrane	33.2	24.35
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	23.12	24.17
CDY65706	Canola	extracellular, plasma membrane	32.21	23.69
CDY49183	Canola	extracellular, plasma membrane	31.82	23.4
KRH76431	Soybean	plasma membrane	32.02	20.96
PGSC0003DMT400031158	Potato	plasma membrane	35.97	18.98
TraesCS4B01G109600.1	Wheat	plasma membrane	37.35	18.62
TraesCS7B01G045600.1	Wheat	plasma membrane	37.15	18.6
TraesCS2B01G379000.2	Wheat	plasma membrane	36.96	18.53
TraesCS2B01G524300.1	Wheat	plasma membrane	36.96	18.53
TraesCS4B01G083700.2	Wheat	plasma membrane	37.15	18.5
Bra029191.1-P	Field mustard	plasma membrane	35.38	18.43
TraesCS7B01G261000.1	Wheat	plasma membrane	36.56	18.03
Os06t0667000-01	Rice	plasma membrane	37.75	18.0
TraesCS3B01G043400.1	Wheat	plasma membrane	33.0	18.0
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	35.57	17.58
AT3G47090.1	Thale cress	plasma membrane	34.98	17.54
Bra018128.1-P	Field mustard	plasma membrane	35.38	17.21
Zm00001d039824_P001	Maize	plasma membrane	35.57	17.21
TraesCS2B01G499100.1	Wheat	plasma membrane	33.6	16.87
Bra005562.1-P	Field mustard	plasma membrane	33.99	16.76
Bra015204.1-P	Field mustard	plasma membrane	33.2	16.67
CDY00454	Canola	plasma membrane	32.02	16.41
TraesCS6B01G252800.1	Wheat	plasma membrane	34.19	16.11
CDX71113	Canola	plasma membrane	17.59	12.97
TraesCS3B01G072800.1	Wheat	mitochondrion	19.76	12.24
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	11.26	10.61
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	0.2	0.27
TraesCS3B01G073100.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072900.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072700.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G383900.1	EnsemblPlantsGene:TraesCS6B01G383900	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF4	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52047
SUPFAM:SSF52058	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:658582414..658583934

Molecular Weight (calculated)

54988.6 Da

IEP (calculated)

9.294

GRAVY (calculated)

0.088

Length

506 amino acids

Sequence
(BLAST)

001: MLPVIKFALL PSVLILASAS SFRALASSNK TDLDALIALK AGLSRHSDAL DSWNITADFC QWHGVICSLN HKQRVSALNL SSAGLRGYVA PSLGNLTYLR
101: SLDLSYNLFH GEIPWTIGQL SQMSYLDLSN NLLQGEIPWT IGQLRQLSHL YLSNNSIEGG IMYGLRNCTR LVSIKLDLNK LHQEIPDWLG GLSRIEVMSL
201: GKNKFTGIIP PSLGNLSSLR ILNINDNQLS GPIPESLGRI SKLEKLGLQV NHLSGTIPRT VFNMSSLAHI GLQMNELSGT LPSDLGNGLP KIDHLILASN
301: HFTRRVASSL ANATTIQSLD LFGNKLIGSV APEIGALCPN FPILKGNQLK SSTAQDWGFI TSLTTCTSVN GVILRHNRFS GVLPSSIANL SRQLEFFDIS
401: FNEIYGKIPV GIGYFPYLIK LGLSSNRFTG AIPDNIGNLK MLQWLTLDNS RISGTMPSSL GNLTQLEDLS VANNVLQGYL PANLGNLQRL VDANFSNNAL
501: SGPLHR

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.