Factsheet for TraesCS6B01G441800.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G443100.1	Wheat	vacuole	90.88	79.4
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	91.82	76.84
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	91.19	76.32
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	78.62	71.43
HORVU6Hr1G092260.1	Barley	extracellular, vacuole	77.99	70.86
HORVU6Hr1G092210.11	Barley	cytosol, extracellular, golgi, mitochondrion	79.25	66.49
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	80.19	65.55
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	66.35	54.1
TraesCS6B01G441300.1	Wheat	plastid	63.52	52.06
TraesCS6B01G441000.1	Wheat	plastid	59.12	50.81
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	30.5	44.91
TraesCS6B01G441500.1	Wheat	mitochondrion	66.35	44.42
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	32.39	38.15
KRH73172	Soybean	extracellular, vacuole	27.99	26.81
TraesCS6B01G019400.1	Wheat	mitochondrion	12.58	23.81
TraesCS6B01G383900.1	Wheat	vacuole	36.48	22.92
TraesCS3B01G011400.1	Wheat	mitochondrion	16.35	17.87
TraesCS3B01G007100.1	Wheat	mitochondrion	16.35	17.87
CDY60624	Canola	plasma membrane	33.96	15.65
CDY49183	Canola	extracellular, plasma membrane	33.65	15.55
CDY65706	Canola	extracellular, plasma membrane	33.65	15.55
TraesCS3B01G043400.1	Wheat	plasma membrane	45.28	15.52
TraesCS2B01G379000.2	Wheat	plasma membrane	47.48	14.97
TraesCS2B01G499100.1	Wheat	plasma membrane	46.86	14.78
Bra014313.1-P	Field mustard	cytosol	33.33	14.66
TraesCS7B01G045600.1	Wheat	plasma membrane	45.28	14.24
TraesCS6B01G252800.1	Wheat	plasma membrane	45.28	13.41
KRH76431	Soybean	plasma membrane	32.39	13.32
TraesCS2B01G524300.1	Wheat	plasma membrane	41.51	13.08
TraesCS4B01G109600.1	Wheat	plasma membrane	40.88	12.81
TraesCS4B01G083700.2	Wheat	plasma membrane	40.57	12.7
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	34.59	10.74
AT3G47090.1	Thale cress	plasma membrane	33.96	10.7
CDX71113	Canola	plasma membrane	22.96	10.64
PGSC0003DMT400031158	Potato	plasma membrane	32.08	10.64
Bra005562.1-P	Field mustard	plasma membrane	34.28	10.62
Bra015204.1-P	Field mustard	plasma membrane	33.65	10.62
Bra018128.1-P	Field mustard	plasma membrane	34.28	10.48
Bra029191.1-P	Field mustard	plasma membrane	31.76	10.4
CDY00454	Canola	plasma membrane	32.08	10.33
TraesCS7B01G261000.1	Wheat	plasma membrane	32.7	10.14
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	15.41	10.12
TraesCS3B01G072800.1	Wheat	mitochondrion	10.69	4.16
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	4.4	2.61
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	0.31	0.27
TraesCS3B01G073100.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072900.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072700.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G441800.1	EnsemblPlantsGene:TraesCS6B01G441800	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:705782840..705784733

Molecular Weight (calculated)

35447.0 Da

IEP (calculated)

8.985

GRAVY (calculated)

-0.045

Length

318 amino acids

Sequence
(BLAST)

001: MAISQAARLA TMLMLLPLLL ISCGVGSILC SSMTTVHDNS TDMISLLDFK RAITNDSRQA LTSWHTSVPL CSWEGVHCSS GRVTKLYLRQ RGLLGRISSS
101: LGNLTFLRTL GLSKNGFTGE LPPLNRLHRL EYLDLGKNPL RGTIPDTLTN CSKLRSLDLS ANLLMGEIPL GIGLLSNLRK VWLSSNNLTG TIPPSLRNNS
201: HLEDIVLTDN RFMGTIPDEM GSFPSLVYLG LAGNMLSGGI PETLYKYNQS SLQYLYLYSN MLGKTLPSNF GDTFPDLEHL CLDNNNFEGH LPASQYFRAK
301: TVKRFFQQFH WSSSRFFW

Best Arabidopsis Sequence Match ( AT5G20480.1 )
(BLAST)

0001: MKLSFSLVFN ALTLLLQVCI FAQARFSNET DMQALLEFKS QVSENNKREV LASWNHSSPF CNWIGVTCGR RRERVISLNL GGFKLTGVIS PSIGNLSFLR
0101: LLNLADNSFG STIPQKVGRL FRLQYLNMSY NLLEGRIPSS LSNCSRLSTV DLSSNHLGHG VPSELGSLSK LAILDLSKNN LTGNFPASLG NLTSLQKLDF
0201: AYNQMRGEIP DEVARLTQMV FFQIALNSFS GGFPPALYNI SSLESLSLAD NSFSGNLRAD FGYLLPNLRR LLLGTNQFTG AIPKTLANIS SLERFDISSN
0301: YLSGSIPLSF GKLRNLWWLG IRNNSLGNNS SSGLEFIGAV ANCTQLEYLD VGYNRLGGEL PASIANLSTT LTSLFLGQNL ISGTIPHDIG NLVSLQELSL
0401: ETNMLSGELP VSFGKLLNLQ VVDLYSNAIS GEIPSYFGNM TRLQKLHLNS NSFHGRIPQS LGRCRYLLDL WMDTNRLNGT IPQEILQIPS LAYIDLSNNF
0501: LTGHFPEEVG KLELLVGLGA SYNKLSGKMP QAIGGCLSME FLFMQGNSFD GAIPDISRLV SLKNVDFSNN NLSGRIPRYL ASLPSLRNLN LSMNKFEGRV
0601: PTTGVFRNAT AVSVFGNTNI CGGVREMQLK PCIVQASPRK RKPLSVRKKV VSGICIGIAS LLLIIIVASL CWFMKRKKKN NASDGNPSDS TTLGMFHEKV
0701: SYEELHSATS RFSSTNLIGS GNFGNVFKGL LGPENKLVAV KVLNLLKHGA TKSFMAECET FKGIRHRNLV KLITVCSSLD SEGNDFRALV YEFMPKGSLD
0801: MWLQLEDLER VNDHSRSLTP AEKLNIAIDV ASALEYLHVH CHDPVAHCDI KPSNILLDDD LTAHVSDFGL AQLLYKYDRE SFLNQFSSAG VRGTIGYAAP
0901: EYGMGGQPSI QGDVYSFGIL LLEMFSGKKP TDESFAGDYN LHSYTKSILS GCTSSGGSNA IDEGLRLVLQ VGIKCSEEYP RDRMRTDEAV RELISIRSKF
1001: FSSKTTITES PRDAPQSSPQ EWMLNTDMHT M

Arabidopsis Description

EFRLRR receptor-like serine/threonine-protein kinase EFR [Source:UniProtKB/Swiss-Prot;Acc:C0LGT6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.