Factsheet for HORVU6Hr1G092260.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G092210.11	Barley	cytosol, extracellular, golgi, mitochondrion	100.0	92.35
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	87.14	87.14
TraesCS6B01G443100.1	Wheat	vacuole	86.57	83.24
TraesCS6A01G401200.1	Wheat	extracellular, mitochondrion, plastid, vacuole	89.71	82.85
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	87.43	80.53
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	86.57	79.74
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	87.71	78.92
TraesCS6D01G385200.1	Wheat	mitochondrion	87.43	78.66
TraesCS6B01G441800.1	Wheat	vacuole	70.86	77.99
HORVU0Hr1G022450.1	Barley	extracellular	41.71	42.69
HORVU2Hr1G107220.3	Barley	cytosol, extracellular	30.86	39.13
HORVU7Hr1G002010.2	Barley	mitochondrion	46.29	38.48
HORVU7Hr1G108460.1	Barley	cytosol	30.29	32.02
HORVU6Hr1G044170.1	Barley	cytosol	41.43	31.73
HORVU2Hr1G107150.1	Barley	cytosol, mitochondrion, plasma membrane	48.0	28.97
KRH73172	Soybean	extracellular, vacuole	27.43	28.92
HORVU7Hr1G002130.8	Barley	mitochondrion	48.57	19.68
CDY60624	Canola	plasma membrane	37.71	19.13
HORVU6Hr1G002290.6	Barley	plasma membrane	54.0	18.75
CDY65706	Canola	extracellular, plasma membrane	36.57	18.6
CDY49183	Canola	extracellular, plasma membrane	36.57	18.6
Bra014313.1-P	Field mustard	cytosol	38.29	18.53
HORVU6Hr1G008930.3	Barley	plasma membrane	52.86	17.55
HORVU2Hr1G087540.10	Barley	plasma membrane	49.71	17.26
KRH76431	Soybean	plasma membrane	38.0	17.21
HORVU2Hr1G107250.3	Barley	plasma membrane	48.29	16.72
HORVU6Hr1G057240.1	Barley	plasma membrane	48.0	16.41
HORVU0Hr1G018390.1	Barley	mitochondrion, plasma membrane, plastid, vacuole	45.43	15.76
Bra015204.1-P	Field mustard	plasma membrane	39.71	13.79
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	40.29	13.77
CDY00454	Canola	plasma membrane	38.29	13.58
Bra018128.1-P	Field mustard	plasma membrane	40.29	13.56
AT3G47090.1	Thale cress	plasma membrane	38.57	13.38
PGSC0003DMT400031158	Potato	plasma membrane	36.57	13.35
Bra005562.1-P	Field mustard	plasma membrane	38.29	13.06
Bra029191.1-P	Field mustard	plasma membrane	36.0	12.98
CDX71113	Canola	plasma membrane	23.71	12.1
HORVU1Hr1G086400.1	Barley	cytosol, nucleus, peroxisome	22.57	9.68
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	8.0	5.21
HORVU6Hr1G044140.2	Barley	vacuole	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU6Hr1G092260
EnsemblPlants:HORVU6Hr1G092260.1	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0VAF0	PFAM:PF00560	PFAM:PF08263	PFscan:PS51450	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI000294C52A	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:577015295..577016347

Molecular Weight (calculated)

38330.6 Da

IEP (calculated)

7.149

GRAVY (calculated)

0.072

Length

350 amino acids

Sequence
(BLAST)

001: MLLSLLLISC GVGIIRCSST TIHGNITDMI SLLDFKWAIT NDSRQALRSW HASVPLCSWE GVHCSSGRVT KLYLSGRGLL GPISPSLGNL TFLRTLDLSR
101: NGFTGELPPL NRLHRLEYID LGNNLLQGTI PDTLTNCSTL RILDLSANLL MGEIPLGIGR LSKLRKVWLS SNNLTGTIPP SLRNSSRLED IVLTDNKLTG
201: TIPDEMGEFT SLVYLGLGVN MLSGGIPETL YKYNQSSLQY LYLYSNMLGK TVPSNFGDTL LNLQHLCLDN NNFEGHLPAS VGNMSGLRLL NLSSNNFIGQ
301: VPGSFGNLVL LEYLILQRNN FWGFLPTELG GLKQLTHLDL SDNNLQGGVP

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.