Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
29385242
|
msms PMID:
29385242
doi
Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G019400.1 | Wheat | mitochondrion | 11.67 | 73.21 |
| HORVU6Hr1G002290.6 | Barley | plasma membrane | 64.52 | 67.46 |
| HORVU1Hr1G086400.1 | Barley | cytosol, nucleus, peroxisome | 47.63 | 61.52 |
| HORVU7Hr1G002130.8 | Barley | mitochondrion | 47.15 | 57.52 |
| HORVU2Hr1G087540.10 | Barley | plasma membrane | 51.52 | 53.87 |
| HORVU6Hr1G092260.1 | Barley | extracellular, vacuole | 17.55 | 52.86 |
| HORVU0Hr1G018390.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 49.53 | 51.73 |
| HORVU6Hr1G057240.1 | Barley | plasma membrane | 48.86 | 50.29 |
| HORVU2Hr1G107250.3 | Barley | plasma membrane | 48.2 | 50.25 |
| HORVU6Hr1G092210.11 | Barley | cytosol, extracellular, golgi, mitochondrion | 17.74 | 49.34 |
| HORVU7Hr1G002010.2 | Barley | mitochondrion | 19.35 | 48.46 |
| HORVU0Hr1G022450.1 | Barley | extracellular | 15.56 | 47.95 |
| HORVU2Hr1G107150.1 | Barley | cytosol, mitochondrion, plasma membrane | 25.43 | 46.21 |
| HORVU6Hr1G044140.2 | Barley | vacuole | 21.06 | 45.87 |
| HORVU2Hr1G107220.3 | Barley | cytosol, extracellular | 11.57 | 44.2 |
| HORVU6Hr1G044170.1 | Barley | cytosol | 18.12 | 41.79 |
| CDX71113 | Canola | plasma membrane | 26.47 | 40.67 |
| HORVU7Hr1G108460.1 | Barley | cytosol | 12.33 | 39.27 |
| AT3G47090.1 | Thale cress | plasma membrane | 37.19 | 38.85 |
| CDY00454 | Canola | plasma membrane | 36.24 | 38.7 |
| PGSC0003DMT400031158 | Potato | plasma membrane | 35.2 | 38.69 |
| PGSC0003DMT400013987 | Potato | cytosol, nucleus, plasma membrane | 37.48 | 38.57 |
| Bra018128.1-P | Field mustard | plasma membrane | 37.95 | 38.46 |
| Bra015204.1-P | Field mustard | plasma membrane | 36.62 | 38.29 |
| Bra014313.1-P | Field mustard | cytosol | 25.52 | 37.21 |
| KRH76431 | Soybean | plasma membrane | 27.13 | 37.0 |
| Bra005562.1-P | Field mustard | plasma membrane | 35.77 | 36.74 |
| CDY49183 | Canola | extracellular, plasma membrane | 23.91 | 36.63 |
| CDY65706 | Canola | extracellular, plasma membrane | 23.81 | 36.48 |
| Bra029191.1-P | Field mustard | plasma membrane | 33.3 | 36.15 |
| KRH73172 | Soybean | extracellular, vacuole | 11.29 | 35.84 |
| CDY60624 | Canola | plasma membrane | 22.96 | 35.07 |
| VIT_18s0001g15800.t01 | Wine grape | cytosol, peroxisome | 17.17 | 33.71 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.12 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | UniProt:A0A287T8T3 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:HORVU6Hr1G008930 | EnsemblPlants:HORVU6Hr1G008930.3 | InterPro:IPR000719 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| PFAM:PF00069 | PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS51450 | PANTHER:PTHR43887 | PANTHER:PTHR43887:SF32 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SMART:SM00369 | SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| TMHMM:TMhelix | UniParc:UPI000B46B8E1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:16157076..16171324
Molecular Weight (calculated)
115961.0 Da
IEP (calculated)
7.654
GRAVY (calculated)
-0.048
Length
1054 amino acids
Sequence
(BLAST)
(BLAST)
0001: IQYPNSHFTP QHPEKTMQER PPSCATRHSK GNGGHMSANL PWRLTMLMLL SLLLISCGVR NARCSIVPSD NSMDMLWLLD FKAATDDPTQ SLSSWNSSIP
0101: HCLWKGVNCS LAHPGRVTAL NLTRQTLQGK IAPSLGNLTL LTTLILSSNG FFGQLPTHNR LHRLQYLELG NNKLQGFNPD ALRNCSNLSY LDLSFNLITS
0201: SLPPNIGSLS SLVQLDLAQN SFFGIIPPSI QNITKLKFLA LSNNQIEGNI PVELGHLPDI TMLLLGGNML SGRIPRTLLN NSALSVLDLN SNFLQMKLPS
0301: NIGDTLPNLI ALQLQDNMFE GKIPASLGNA SFLFIIQLSY NNLTGQIPTS FGNLRDMTYL ELDHNKLDAK DNQGWKFLDA LSNCGSLQVL GLNDNHLNGA
0401: IPNSVGNLST SLKELGFHYN YLSGTVPEGI RNLTGLTMLL LDHNNLTGPI GTWVGNFKNL SVVSLSDNKF TGLIPSSIGS LAQLTELFFS RNNFEGPIPP
0501: SLGNLPFLLQ LDLSNNSLQG HIPNELFSRL SGMTNCIISY NNLDGPIPPE VSNLKQLTKL DLSSNKLSGQ IPVTLGECQG LEILLVDNNF LSGNIPKSMS
0601: GLKSLSMLNL SHNNLSGSIA TELSNLPYLT QLDLSYNNLQ GEIPRDGVFR NATATSVEGN WGLCGGAMDL HMPMCPTVSR KSETEYYLVR ALIPLFGFMS
0701: LIMLTYVIFF GKKTSQRTYT ILLSFGKKFP RVAYNDLAGA TGNFSELNLV GRGSYGSVYR GKLTQAKIQV AIKVFDLDMK FADKSFVTEC EVLCRIRHRN
0801: LVPILTACST IDNKGDPFKS LIYEFMPNGN LDTWLHNKYL GSSTRCLSLA QRTSTAIGIA DALAYLHNDC ERQIAHCDLK PTNILLDDDM NAYLGDFGIA
0901: SLIGHSTLDT SMGLKGTIGY IAPEYGQSGQ ASTHGDVYSF GIVLLEMLIG KRPTADPMFE NELNMVNFVQ RSYPDKIHHI IDARLSGECK IYIRTSIGTE
1001: NAAHGCVLSL MQVALSCTRL IPRERMSIRE VANKLHSIQT LYIRETKREQ VLLR
0101: HCLWKGVNCS LAHPGRVTAL NLTRQTLQGK IAPSLGNLTL LTTLILSSNG FFGQLPTHNR LHRLQYLELG NNKLQGFNPD ALRNCSNLSY LDLSFNLITS
0201: SLPPNIGSLS SLVQLDLAQN SFFGIIPPSI QNITKLKFLA LSNNQIEGNI PVELGHLPDI TMLLLGGNML SGRIPRTLLN NSALSVLDLN SNFLQMKLPS
0301: NIGDTLPNLI ALQLQDNMFE GKIPASLGNA SFLFIIQLSY NNLTGQIPTS FGNLRDMTYL ELDHNKLDAK DNQGWKFLDA LSNCGSLQVL GLNDNHLNGA
0401: IPNSVGNLST SLKELGFHYN YLSGTVPEGI RNLTGLTMLL LDHNNLTGPI GTWVGNFKNL SVVSLSDNKF TGLIPSSIGS LAQLTELFFS RNNFEGPIPP
0501: SLGNLPFLLQ LDLSNNSLQG HIPNELFSRL SGMTNCIISY NNLDGPIPPE VSNLKQLTKL DLSSNKLSGQ IPVTLGECQG LEILLVDNNF LSGNIPKSMS
0601: GLKSLSMLNL SHNNLSGSIA TELSNLPYLT QLDLSYNNLQ GEIPRDGVFR NATATSVEGN WGLCGGAMDL HMPMCPTVSR KSETEYYLVR ALIPLFGFMS
0701: LIMLTYVIFF GKKTSQRTYT ILLSFGKKFP RVAYNDLAGA TGNFSELNLV GRGSYGSVYR GKLTQAKIQV AIKVFDLDMK FADKSFVTEC EVLCRIRHRN
0801: LVPILTACST IDNKGDPFKS LIYEFMPNGN LDTWLHNKYL GSSTRCLSLA QRTSTAIGIA DALAYLHNDC ERQIAHCDLK PTNILLDDDM NAYLGDFGIA
0901: SLIGHSTLDT SMGLKGTIGY IAPEYGQSGQ ASTHGDVYSF GIVLLEMLIG KRPTADPMFE NELNMVNFVQ RSYPDKIHHI IDARLSGECK IYIRTSIGTE
1001: NAAHGCVLSL MQVALSCTRL IPRERMSIRE VANKLHSIQT LYIRETKREQ VLLR
0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.