Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G107150.1 | Barley | cytosol, mitochondrion, plasma membrane | 72.65 | 57.24 |
| HORVU2Hr1G107220.3 | Barley | cytosol, extracellular | 31.29 | 51.81 |
| HORVU0Hr1G022450.1 | Barley | extracellular | 31.29 | 41.81 |
| HORVU6Hr1G092260.1 | Barley | extracellular, vacuole | 31.73 | 41.43 |
| HORVU7Hr1G108460.1 | Barley | cytosol | 29.98 | 41.39 |
| TraesCS2A01G475400.1 | Wheat | cytosol, nucleus, vacuole | 27.57 | 38.53 |
| HORVU6Hr1G092210.11 | Barley | cytosol, extracellular, golgi, mitochondrion | 31.73 | 38.26 |
| HORVU7Hr1G002010.2 | Barley | mitochondrion | 33.26 | 36.1 |
| KRH73172 | Soybean | extracellular, vacuole | 25.38 | 34.94 |
| TraesCS2D01G475300.1 | Wheat | plasma membrane | 69.15 | 33.05 |
| HORVU2Hr1G107250.3 | Barley | plasma membrane | 59.96 | 27.1 |
| HORVU6Hr1G057240.1 | Barley | plasma membrane | 58.64 | 26.17 |
| HORVU7Hr1G002130.8 | Barley | mitochondrion | 43.76 | 23.15 |
| Bra014313.1-P | Field mustard | cytosol | 33.7 | 21.3 |
| CDY60624 | Canola | plasma membrane | 31.51 | 20.87 |
| CDY65706 | Canola | extracellular, plasma membrane | 30.85 | 20.49 |
| CDY49183 | Canola | extracellular, plasma membrane | 30.63 | 20.35 |
| HORVU2Hr1G087540.10 | Barley | plasma membrane | 43.98 | 19.94 |
| KRH76431 | Soybean | plasma membrane | 32.82 | 19.4 |
| HORVU6Hr1G002290.6 | Barley | plasma membrane | 42.45 | 19.25 |
| HORVU0Hr1G018390.1 | Barley | mitochondrion, plasma membrane, plastid, vacuole | 41.79 | 18.93 |
| TraesCS2D01G474300.1 | Wheat | plasma membrane | 29.98 | 18.19 |
| HORVU6Hr1G008930.3 | Barley | plasma membrane | 41.79 | 18.12 |
| AT3G47090.1 | Thale cress | plasma membrane | 36.1 | 16.35 |
| PGSC0003DMT400031158 | Potato | plasma membrane | 32.39 | 15.43 |
| Bra018128.1-P | Field mustard | plasma membrane | 35.01 | 15.38 |
| Bra015204.1-P | Field mustard | plasma membrane | 33.48 | 15.18 |
| Bra029191.1-P | Field mustard | plasma membrane | 32.17 | 15.14 |
| PGSC0003DMT400013987 | Potato | cytosol, nucleus, plasma membrane | 33.92 | 15.14 |
| CDY00454 | Canola | plasma membrane | 32.17 | 14.89 |
| Bra005562.1-P | Field mustard | plasma membrane | 31.73 | 14.13 |
| HORVU1Hr1G086400.1 | Barley | cytosol, nucleus, peroxisome | 22.54 | 12.62 |
| CDX71113 | Canola | plasma membrane | 15.75 | 10.5 |
| VIT_18s0001g15800.t01 | Wine grape | cytosol, peroxisome | 7.22 | 6.15 |
| HORVU6Hr1G044140.2 | Barley | vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G044170.1 | EnsemblPlantsGene:HORVU6Hr1G044170 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | ncoils:Coil |
| PANTHER:PTHR43887 | PANTHER:PTHR43887:SF32 | PFAM:PF00560 | PFAM:PF08263 | PFAM:PF13855 | SEG:seg |
| SUPFAM:SSF52047 | UniParc:UPI000B474E5D | UniProt:A0A287U2D7 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr6H:+:251759732..251761294
Molecular Weight (calculated)
43764.7 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.047
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXTVSHENRT DVHSLLEFKA ATNDPTGALR SWNRRVHYCN WTGVRCSSLK PERVVALRLP GQSLSGEISP SFGNLTYLKV
101: LDLSSNGFSG LLPPMNLLHE LVHLDLSFNS FQGTIPDSLM NCSNLHYLVL SGNMLQGPIP KKIGSLYNLL GLGLARNNLT GVIPPTISNA TQLEQLDLGE
201: NELGGSIPDV FGQWPKMLEL SVGENRLSGR IPPSFFNLTS VQILGLYANK LQGELPPDIG DTLPENILFS LGENMLHGHI PASLGNASRL QLMDLSDNSF
301: VGEIPIFGKL PNLENLNLGY NMLESSESQR WESLYGLTNC SNLYALTLDN NQLQGAIPDL VGKLSTKLTR LHMNGNNLSG IVPLSLANRS SIIDLDLSNN
401: SLTGKIEGWL GSLINLQYLD XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXLLL
101: LDLSSNGFSG LLPPMNLLHE LVHLDLSFNS FQGTIPDSLM NCSNLHYLVL SGNMLQGPIP KKIGSLYNLL GLGLARNNLT GVIPPTISNA TQLEQLDLGE
201: NELGGSIPDV FGQWPKMLEL SVGENRLSGR IPPSFFNLTS VQILGLYANK LQGELPPDIG DTLPENILFS LGENMLHGHI PASLGNASRL QLMDLSDNSF
301: VGEIPIFGKL PNLENLNLGY NMLESSESQR WESLYGLTNC SNLYALTLDN NQLQGAIPDL VGKLSTKLTR LHMNGNNLSG IVPLSLANRS SIIDLDLSNN
401: SLTGKIEGWL GSLINLQYLD XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXLLL
0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.