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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, extracellular, cytosol

Predictor Summary:
  • mitochondrion 2
  • extracellular 1
  • cytosol 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular, golgi, mitochondrion
Any Predictor:cytosol, extracellular, golgi, mitochondrion
iPSORT:mitochondrion
MultiLoc:extracellular
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G092260.1 Barley extracellular, vacuole 92.35 100.0
TraesCS6A01G401200.1 Wheat extracellular, mitochondrion, plastid, vacuole 88.92 88.92
TraesCS6B01G443200.1 Wheat extracellular, nucleus, plastid, vacuole 80.47 87.14
TraesCS6D01G385100.1 Wheat extracellular, mitochondrion, plastid, vacuole 86.02 85.79
TraesCS6B01G443400.2 Wheat cytosol, extracellular, golgi, mitochondrion 86.81 84.58
TraesCS6B01G441700.1 Wheat extracellular, mitochondrion, plastid, vacuole 84.7 84.47
TraesCS6B01G443100.1 Wheat vacuole 81.0 84.34
TraesCS6D01G385200.1 Wheat mitochondrion 85.22 83.03
TraesCS6B01G441800.1 Wheat vacuole 66.49 79.25
HORVU0Hr1G022450.1 Barley extracellular 38.52 42.69
HORVU2Hr1G107220.3 Barley cytosol, extracellular 29.82 40.94
HORVU7Hr1G002010.2 Barley mitochondrion 43.54 39.19
HORVU7Hr1G108460.1 Barley cytosol 27.97 32.02
HORVU6Hr1G044170.1 Barley cytosol 38.26 31.73
HORVU2Hr1G107150.1 Barley cytosol, mitochondrion, plasma membrane 45.12 29.48
KRH73172 Soybean extracellular, vacuole 25.33 28.92
HORVU7Hr1G002130.8 Barley mitochondrion 45.12 19.79
CDY60624 Canola plasma membrane 34.83 19.13
HORVU6Hr1G002290.6 Barley plasma membrane 49.87 18.75
CDY65706 Canola extracellular, plasma membrane 33.77 18.6
CDY49183 Canola extracellular, plasma membrane 33.77 18.6
Bra014313.1-P Field mustard cytosol 35.36 18.53
HORVU6Hr1G008930.3 Barley plasma membrane 49.34 17.74
HORVU2Hr1G087540.10 Barley plasma membrane 45.91 17.26
KRH76431 Soybean plasma membrane 35.09 17.21
HORVU2Hr1G107250.3 Barley plasma membrane 45.12 16.91
HORVU6Hr1G057240.1 Barley plasma membrane 44.33 16.41
HORVU0Hr1G018390.1 Barley mitochondrion, plasma membrane, plastid, vacuole 42.48 15.96
Bra015204.1-P Field mustard plasma membrane 36.68 13.79
PGSC0003DMT400013987 Potato cytosol, nucleus, plasma membrane 37.2 13.77
CDY00454 Canola plasma membrane 35.36 13.58
Bra018128.1-P Field mustard plasma membrane 37.2 13.56
AT3G47090.1 Thale cress plasma membrane 35.62 13.38
PGSC0003DMT400031158 Potato plasma membrane 33.77 13.35
Bra005562.1-P Field mustard plasma membrane 35.36 13.06
Bra029191.1-P Field mustard plasma membrane 33.25 12.98
CDX71113 Canola plasma membrane 21.9 12.1
HORVU1Hr1G086400.1 Barley cytosol, nucleus, peroxisome 20.84 9.68
VIT_18s0001g15800.t01 Wine grape cytosol, peroxisome 7.39 5.21
HORVU6Hr1G044140.2 Barley vacuole 0.0 0.0
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1UniProt:A0A287V734GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:HORVU6Hr1G092210EnsemblPlants:HORVU6Hr1G092210.11InterPro:IPR001611
InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00560
PFAM:PF08263PFscan:PS51450PANTHER:PTHR43887PANTHER:PTHR43887:SF32SMART:SM00369SUPFAM:SSF52058
TMHMM:TMhelixUniParc:UPI000B465089SEG:seg:::
Description
No Description!
Coordinates
chrchr6H:-:576946041..576953382
Molecular Weight (calculated)
41643.8 Da
IEP (calculated)
8.573
GRAVY (calculated)
0.062
Length
379 amino acids
Sequence
(BLAST)
001: MQERLPFRVI RPSKGDRVLG KALRLAPIIM LLSLLLISCG VGIIRCSSTT IHGNITDMIS LLDFKWAITN DSRQALRSWH ASVPLCSWEG VHCSSGRVTK
101: LYLSGRGLLG PISPSLGNLT FLRTLDLSRN GFTGELPPLN RLHRLEYIDL GNNLLQGTIP DTLTNCSTLR ILDLSANLLM GEIPLGIGRL SKLRKVWLSS
201: NNLTGTIPPS LRNSSRLEDI VLTDNKLTGT IPDEMGEFTS LVYLGLGVNM LSGGIPETLY KYNQSSLQYL YLYSNMLGKT VPSNFGDTLL NLQHLCLDNN
301: NFEGHLPASV GNMSGLRLLN LSSNNFIGQV PGSFGNLVLL EYLILQRNNF WGFLPTELGG LKQLTHLDLS DNNLQGGVP
Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)
0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.