Factsheet for TraesCS6B01G443200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plastid, extracellular, nucleus

Predictor Summary:

plastid 2
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, plastid, vacuole
Any Predictor:	extracellular, nucleus, plastid, vacuole
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G092260.1	Barley	extracellular, vacuole	87.14	87.14
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	94.29	84.83
TraesCS6B01G443100.1	Wheat	vacuole	86.86	83.52
TraesCS6A01G401200.1	Wheat	extracellular, mitochondrion, plastid, vacuole	88.86	82.06
TraesCS6D01G385200.1	Wheat	mitochondrion	90.0	80.98
HORVU6Hr1G092210.11	Barley	cytosol, extracellular, golgi, mitochondrion	87.14	80.47
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	86.86	80.0
TraesCS6B01G441800.1	Wheat	vacuole	71.43	78.62
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	70.57	63.33
TraesCS6B01G441300.1	Wheat	plastid	68.86	62.11
TraesCS6B01G441500.1	Wheat	mitochondrion	71.14	52.42
TraesCS6B01G441000.1	Wheat	plastid	52.86	50.0
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	27.43	44.44
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	33.43	43.33
TraesCS6B01G019400.1	Wheat	mitochondrion	14.86	30.95
KRH73172	Soybean	extracellular, vacuole	27.71	29.22
TraesCS6B01G383900.1	Wheat	vacuole	39.43	27.27
TraesCS3B01G007100.1	Wheat	mitochondrion	20.29	24.4
TraesCS3B01G011400.1	Wheat	mitochondrion	20.29	24.4
CDY60624	Canola	plasma membrane	36.57	18.55
Bra014313.1-P	Field mustard	cytosol	38.0	18.4
TraesCS3B01G043400.1	Wheat	plasma membrane	48.29	18.21
CDY49183	Canola	extracellular, plasma membrane	35.43	18.02
CDY65706	Canola	extracellular, plasma membrane	35.43	18.02
TraesCS2B01G379000.2	Wheat	plasma membrane	50.86	17.64
TraesCS2B01G499100.1	Wheat	plasma membrane	49.71	17.26
KRH76431	Soybean	plasma membrane	37.43	16.95
TraesCS7B01G045600.1	Wheat	plasma membrane	48.57	16.82
TraesCS6B01G252800.1	Wheat	plasma membrane	46.86	15.27
TraesCS2B01G524300.1	Wheat	plasma membrane	43.43	15.06
TraesCS4B01G109600.1	Wheat	plasma membrane	42.86	14.78
TraesCS4B01G083700.2	Wheat	plasma membrane	42.29	14.57
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	20.0	14.46
Bra015204.1-P	Field mustard	plasma membrane	38.86	13.49
PGSC0003DMT400031158	Potato	plasma membrane	36.57	13.35
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	38.86	13.28
CDY00454	Canola	plasma membrane	37.43	13.27
AT3G47090.1	Thale cress	plasma membrane	37.43	12.98
Bra018128.1-P	Field mustard	plasma membrane	38.57	12.98
Bra005562.1-P	Field mustard	plasma membrane	37.14	12.67
TraesCS7B01G261000.1	Wheat	plasma membrane	36.57	12.48
Bra029191.1-P	Field mustard	plasma membrane	34.57	12.46
CDX71113	Canola	plasma membrane	22.29	11.37
TraesCS3B01G072800.1	Wheat	mitochondrion	16.57	7.1
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	8.0	5.21
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	0.29	0.27
TraesCS3B01G073100.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072900.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072700.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G443200.1	EnsemblPlantsGene:TraesCS6B01G443200	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:706442752..706443804

Molecular Weight (calculated)

38692.7 Da

IEP (calculated)

6.084

GRAVY (calculated)

-0.061

Length

350 amino acids

Sequence
(BLAST)

001: MLLSLLLISC GVGSIRCSSM TVYDNITDMI SLLDFKRDIT NDSRQALRSW HANIPLCSWE GVHCNLGRVT KPHLSEQGLL GQISPSLGNL TFLRTLDLSK
101: NGFTGELPPL NRLHRLEYLD LGHNSLQGTI PDTLTNCSKL RILDLSANLL MGEIPLAIGR LSNLREVWLS SNNLTGTIQP SLKNNSQLED IVLTDNKLTG
201: TIPDEMGIFP SLVYLGLGGN MLSGGIPETL YKYNQSSLQY LYLYSNMLGK TLPSNFGDTF PDLKHLCLDN NNFEGHLPAS LGNISRLRLL NLSSNNFIGQ
301: VPGSFGNLAL LEYLILQRNN FWGFMPIEFG DLKQLTHLDT SDNNLQGGVP

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.