Factsheet for TraesCS6B01G441000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G385000.1	Wheat	mitochondrion	28.65	80.92
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	46.22	73.08
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	70.54	66.92
TraesCS6B01G441300.1	Wheat	plastid	65.41	62.37
TraesCS6B01G441800.1	Wheat	vacuole	50.81	59.12
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	50.0	52.86
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	55.41	52.7
TraesCS6B01G443100.1	Wheat	vacuole	50.54	51.37
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	52.7	51.32
TraesCS6B01G441500.1	Wheat	mitochondrion	58.65	45.68
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	25.41	43.52
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	28.92	39.63
KRH73172	Soybean	extracellular, vacuole	22.7	25.3
TraesCS6B01G383900.1	Wheat	vacuole	29.19	21.34
TraesCS6B01G019400.1	Wheat	mitochondrion	8.65	19.05
CDY65706	Canola	extracellular, plasma membrane	28.65	15.41
CDY49183	Canola	extracellular, plasma membrane	28.38	15.26
Bra014313.1-P	Field mustard	cytosol	29.46	15.08
CDY60624	Canola	plasma membrane	28.11	15.07
TraesCS3B01G007100.1	Wheat	mitochondrion	11.35	14.43
TraesCS3B01G011400.1	Wheat	mitochondrion	11.35	14.43
TraesCS2B01G379000.2	Wheat	plasma membrane	38.65	14.17
TraesCS3B01G043400.1	Wheat	plasma membrane	34.86	13.9
TraesCS2B01G499100.1	Wheat	plasma membrane	37.03	13.59
TraesCS7B01G045600.1	Wheat	plasma membrane	33.51	12.27
KRH76431	Soybean	plasma membrane	25.41	12.16
TraesCS6B01G252800.1	Wheat	plasma membrane	34.05	11.73
TraesCS4B01G109600.1	Wheat	plasma membrane	31.89	11.63
TraesCS2B01G524300.1	Wheat	plasma membrane	31.08	11.4
TraesCS4B01G083700.2	Wheat	plasma membrane	31.08	11.32
Bra015204.1-P	Field mustard	plasma membrane	29.73	10.91
CDX71113	Canola	plasma membrane	19.73	10.64
CDY00454	Canola	plasma membrane	28.38	10.64
Bra018128.1-P	Field mustard	plasma membrane	29.19	10.38
AT3G47090.1	Thale cress	plasma membrane	27.84	10.21
Bra029191.1-P	Field mustard	plasma membrane	26.76	10.2
PGSC0003DMT400031158	Potato	plasma membrane	26.22	10.11
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	27.57	9.96
Bra005562.1-P	Field mustard	plasma membrane	27.57	9.94
TraesCS7B01G261000.1	Wheat	plasma membrane	25.41	9.16
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	11.08	8.47
TraesCS3B01G072800.1	Wheat	mitochondrion	6.76	3.06
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	3.78	2.61
TraesCS3B01G073100.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072900.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072700.1	Wheat	plastid	0.0	0.0
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G441000.1	EnsemblPlantsGene:TraesCS6B01G441000	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR43887	PANTHER:PTHR43887:SF32	PFAM:PF08263	PFAM:PF13855	SEG:seg	SMART:SM00369
SUPFAM:SSF52058	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:705580177..705581593

Molecular Weight (calculated)

40048.9 Da

IEP (calculated)

8.817

GRAVY (calculated)

0.162

Length

370 amino acids

Sequence
(BLAST)

001: MSIQLSQAHL TTPHNPAGSK TMEGSGPPFR AIRPSKGAIL VKYSTAKQTS IFCLAVGFVT AASKLFLHII SEVIALLIYS SHIAGQGGLL TCQPARLARI
101: LTLLSLLLIS CGVGSIRCSS STTTIHDNST DMISLLDFKR AITNDSSQAL RSWHVGVPLC GWKGVVCSDP KHLGRVIELN LMNLSLSGTI SPSLGNLTFL
201: RRLDLFSNGC TSKIPPLNRL QRLEYLDLGY NSLQGIIPNT LTNCSNLWYL VLSSNLLIGE VPSGIGCLSN LVSLELGGNN LTGEIPPSLK NSSQLEYIWL
301: ADNKLTGTIP DELGKLPNLS YLYLEENRLS GRIPKTLYKY NQSCLKILDL SSNMLGKTLS SNFGDTLLNL

Best Arabidopsis Sequence Match ( AT3G47570.1 )
(BLAST)

0001: MRLFLLLAFN ALMLLETHGF TDETDRQALL QFKSQVSEDK RVVLSSWNHS FPLCNWKGVT CGRKNKRVTH LELGRLQLGG VISPSIGNLS FLVSLDLYEN
0101: FFGGTIPQEV GQLSRLEYLD MGINYLRGPI PLGLYNCSRL LNLRLDSNRL GGSVPSELGS LTNLVQLNLY GNNMRGKLPT SLGNLTLLEQ LALSHNNLEG
0201: EIPSDVAQLT QIWSLQLVAN NFSGVFPPAL YNLSSLKLLG IGYNHFSGRL RPDLGILLPN LLSFNMGGNY FTGSIPTTLS NISTLERLGM NENNLTGSIP
0301: TFGNVPNLKL LFLHTNSLGS DSSRDLEFLT SLTNCTQLET LGIGRNRLGG DLPISIANLS AKLVTLDLGG TLISGSIPYD IGNLINLQKL ILDQNMLSGP
0401: LPTSLGKLLN LRYLSLFSNR LSGGIPAFIG NMTMLETLDL SNNGFEGIVP TSLGNCSHLL ELWIGDNKLN GTIPLEIMKI QQLLRLDMSG NSLIGSLPQD
0501: IGALQNLGTL SLGDNKLSGK LPQTLGNCLT MESLFLEGNL FYGDIPDLKG LVGVKEVDLS NNDLSGSIPE YFASFSKLEY LNLSFNNLEG KVPVKGIFEN
0601: ATTVSIVGNN DLCGGIMGFQ LKPCLSQAPS VVKKHSSRLK KVVIGVSVGI TLLLLLFMAS VTLIWLRKRK KNKETNNPTP STLEVLHEKI SYGDLRNATN
0701: GFSSSNMVGS GSFGTVYKAL LLTEKKVVAV KVLNMQRRGA MKSFMAECES LKDIRHRNLV KLLTACSSID FQGNEFRALI YEFMPNGSLD MWLHPEEVEE
0801: IHRPSRTLTL LERLNIAIDV ASVLDYLHVH CHEPIAHCDL KPSNVLLDDD LTAHVSDFGL ARLLLKFDEE SFFNQLSSAG VRGTIGYAAP EYGVGGQPSI
0901: NGDVYSFGIL LLEMFTGKRP TNELFGGNFT LNSYTKSALP ERILDIVDES ILHIGLRVGF PVVECLTMVF EVGLRCCEES PMNRLATSIV VKELISIRER
1001: FFKASRTTWR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Source:UniProtKB/Swiss-Prot;Acc:C0LGP4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.