Factsheet for TraesCS6B01G441300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 1
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	79.12	78.72
TraesCS6D01G385000.1	Wheat	mitochondrion	23.97	70.99
TraesCS6A01G400700.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	41.75	69.23
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	62.11	68.86
TraesCS6B01G443100.1	Wheat	vacuole	62.89	67.03
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	64.69	66.05
TraesCS6B01G441000.1	Wheat	plastid	62.37	65.41
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	65.46	65.3
TraesCS6B01G441800.1	Wheat	vacuole	52.06	63.52
TraesCS6B01G441500.1	Wheat	mitochondrion	70.36	57.47
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	24.48	43.98
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	29.38	42.22
TraesCS6B01G019400.1	Wheat	mitochondrion	12.63	29.17
KRH73172	Soybean	extracellular, vacuole	24.74	28.92
TraesCS6B01G383900.1	Wheat	vacuole	34.54	26.48
TraesCS3B01G007100.1	Wheat	mitochondrion	18.56	24.74
TraesCS3B01G011400.1	Wheat	mitochondrion	18.56	24.74
CDY65706	Canola	extracellular, plasma membrane	34.79	19.62
CDY60624	Canola	plasma membrane	34.79	19.57
CDY49183	Canola	extracellular, plasma membrane	34.54	19.48
Bra014313.1-P	Field mustard	cytosol	35.82	19.23
TraesCS3B01G043400.1	Wheat	plasma membrane	44.07	18.43
TraesCS2B01G379000.2	Wheat	plasma membrane	45.88	17.64
TraesCS2B01G499100.1	Wheat	plasma membrane	45.1	17.36
KRH76431	Soybean	plasma membrane	33.25	16.69
TraesCS7B01G045600.1	Wheat	plasma membrane	42.01	16.12
TraesCS6B01G252800.1	Wheat	plasma membrane	43.56	15.74
TraesCS2B01G524300.1	Wheat	plasma membrane	38.4	14.77
TraesCS4B01G109600.1	Wheat	plasma membrane	38.4	14.68
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	18.3	14.67
TraesCS4B01G083700.2	Wheat	plasma membrane	38.14	14.57
Bra015204.1-P	Field mustard	plasma membrane	36.08	13.89
CDY00454	Canola	plasma membrane	34.79	13.68
PGSC0003DMT400031158	Potato	plasma membrane	33.76	13.66
Bra018128.1-P	Field mustard	plasma membrane	36.34	13.56
Bra029191.1-P	Field mustard	plasma membrane	33.76	13.49
AT3G47090.1	Thale cress	plasma membrane	35.05	13.48
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	35.05	13.28
Bra005562.1-P	Field mustard	plasma membrane	35.05	13.26
TraesCS7B01G261000.1	Wheat	plasma membrane	32.99	12.48
CDX71113	Canola	plasma membrane	21.39	12.1
TraesCS3B01G072800.1	Wheat	mitochondrion	13.92	6.61
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	6.96	5.03
TraesCS3B01G073100.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072900.1	Wheat	mitochondrion	0.0	0.0
TraesCS3B01G072700.1	Wheat	plastid	0.0	0.0
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6B01G441300.1	EnsemblPlantsGene:TraesCS6B01G441300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	PFAM:PF08263	PFAM:PF13855	SEG:seg	SUPFAM:SSF52058	MapMan:35.1

Description

No Description!

Coordinates

chr6B:-:705628305..705629687

Molecular Weight (calculated)

42212.2 Da

IEP (calculated)

5.678

GRAVY (calculated)

0.072

Length

388 amino acids

Sequence
(BLAST)

001: MEGSKPPFLA IQPSKDLGGN LTCASQPARL TSILTLLSLL LLSCGVGSIR CSSSTTTIHD NSTDMMSLLD FKRAITTSQA LRSWDLGIPL CGWNGVVCSG
101: LEHPGRVIKL NLVNLSLSGM ISPSLGNLSF LRRLDLSING FTGEIPPLNR LQRLEDLLLG QNSLRGTIPD TLTNCSNLYE LFLSSNLLIG EVPSGIGRLS
201: NLLLLFLGGN NLTGEIPPRL KNSSQLEYIL LADNKLTGTI IDELGKLPNL SELNLAENRL SCGIPETLYK YNQSSLRYLF LDSNMLGKTL PSNFGDTILN
301: LKVLTLYENN FEGHLPASLG NISGLKWLDL SFNNFVGQVQ SSFGNLGLIQ HLDLQQNNLM GFIPRELSGL QHLTNLYLSD NNLEGGVP

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.