Factsheet for TraesCS6B01G252800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G205800.1	Wheat	extracellular	9.87	79.1
TraesCS3B01G043400.1	Wheat	plasma membrane	56.33	65.19
TraesCS6D01G205900.1	Wheat	plasma membrane	47.11	61.19
Zm00001d051094_P001	Maize	plasma membrane	32.96	59.8
Zm00001d051088_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	34.92	58.87
Zm00001d051096_P001	Maize	cytosol, nucleus, peroxisome	42.92	58.8
Zm00001d051099_P001	Maize	plasma membrane	54.0	58.53
Zm00001d051093_P001	Maize	plasma membrane	47.02	57.32
Zm00001d051085_P001	Maize	plasma membrane	45.34	56.69
TraesCS2B01G379000.2	Wheat	plasma membrane	51.3	54.61
TraesCS7B01G045600.1	Wheat	plasma membrane	48.32	51.34
TraesCS2B01G499100.1	Wheat	plasma membrane	48.14	51.29
TraesCS6B01G019400.1	Wheat	mitochondrion	8.01	51.19
TraesCS3B01G072700.1	Wheat	plastid	15.83	50.45
Os02t0614966-00	Rice	extracellular	14.06	50.33
TraesCS7B01G416300.1	Wheat	cytosol, plastid, vacuole	12.57	50.0
TraesCS6B01G443200.1	Wheat	extracellular, nucleus, plastid, vacuole	15.27	46.86
TraesCS3B01G072900.1	Wheat	mitochondrion	16.85	46.17
KXG21282	Sorghum	extracellular, vacuole	21.88	46.08
TraesCS3B01G073100.1	Wheat	mitochondrion	16.76	45.92
TraesCS6B01G443100.1	Wheat	vacuole	15.55	45.88
TraesCS2B01G524300.1	Wheat	plasma membrane	42.92	45.69
TraesCS6B01G441800.1	Wheat	vacuole	13.41	45.28
TraesCS4B01G083700.2	Wheat	plasma membrane	42.55	44.98
TraesCS4B01G109600.1	Wheat	plasma membrane	42.46	44.93
TraesCS3B01G072600.1	Wheat	cytosol, peroxisome, plastid	19.93	44.21
TraesCS6B01G441700.1	Wheat	extracellular, mitochondrion, plastid, vacuole	15.55	43.95
TraesCS3B01G072800.1	Wheat	mitochondrion	33.43	43.94
TraesCS2B01G613600.1	Wheat	golgi, plasma membrane	15.36	43.77
TraesCS6B01G441300.1	Wheat	plastid	15.74	43.56
TraesCS3B01G011400.1	Wheat	mitochondrion	11.64	42.96
TraesCS3B01G007100.1	Wheat	mitochondrion	11.64	42.96
TraesCS6B01G443400.2	Wheat	cytosol, extracellular, golgi, mitochondrion	15.36	42.42
TraesCS6B01G442300.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	15.36	42.31
TraesCS6B01G019300.1	Wheat	cytosol, plasma membrane, vacuole	8.29	41.2
AT3G47090.1	Thale cress	plasma membrane	36.69	39.05
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	37.15	38.96
CDX71113	Canola	plasma membrane	24.86	38.92
PGSC0003DMT400031158	Potato	plasma membrane	34.64	38.79
CDY00454	Canola	plasma membrane	35.38	38.5
TraesCS7B01G261000.1	Wheat	plasma membrane	36.78	38.5
Bra018128.1-P	Field mustard	plasma membrane	37.24	38.46
Bra005562.1-P	Field mustard	plasma membrane	36.59	38.3
Bra015204.1-P	Field mustard	plasma membrane	35.94	38.29
KRH73172	Soybean	extracellular, vacuole	11.55	37.35
Bra014313.1-P	Field mustard	cytosol	24.95	37.07
KRH76431	Soybean	plasma membrane	26.63	37.0
CDY49183	Canola	extracellular, plasma membrane	23.18	36.19
Bra029191.1-P	Field mustard	plasma membrane	32.59	36.05
CDY65706	Canola	extracellular, plasma membrane	23.0	35.9
CDY60624	Canola	plasma membrane	22.91	35.65
TraesCS6B01G441500.1	Wheat	mitochondrion	15.36	34.74
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	17.23	34.45
TraesCS6B01G383900.1	Wheat	vacuole	16.11	34.19
TraesCS6B01G441000.1	Wheat	plastid	11.73	34.05

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR43887
PANTHER:PTHR43887:SF32	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00365	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G252800	EnsemblPlants:TraesCS6B01G252800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:453277206..453280530

Molecular Weight (calculated)

117866.0 Da

IEP (calculated)

6.478

GRAVY (calculated)

-0.035

Length

1074 amino acids

Sequence
(BLAST)

0001: MRSPKQLAKL AMLLLLALLL LCNGVRNVHC SRIHENSVDL HSLIEFNKSI TDDPQGALSN WDTTTHFCHW NGVNCTTTPP FRVKQLKLSG WNLGGQITSS
0101: LGNLTFLETL DLSYNNFVGP LPILGNLQRL QTLYLYHNRL NGMIPDSITN CSNLANLDLS ANSLVGVIPP KLDLLSNLSY LNLSRNSLAG VIPTKLGFLS
0201: NLTVVDLSVN LLVGQIPPKL DLLSKLFYLD LSRNSLVGQI PPRLGFLKNL EYLYLGSNQL EGSIPDELGQ LLQLEQLLLG NNKLTGEFPH AILNSLGSLK
0301: YLGLGSNMLR NALPTNIGDR LPNLIELTLA GNMFEGNIPA SLGSAQGLEL IDLSNNSFTG IIPTSFRNLS SLTILNLEYN QLETRDNRDW EFLNALTNCR
0401: SLKKLSLSYN QLQGPIPQSV GNLSPSLESL RLTGNNLSGQ VPQSIRKLNA LTQLALGENY LSGRVEGWVG NLTSLQLLNL KSNHFTGPIP SSIGNLVNLT
0501: YFYINDNEFD GVIPASLGNL PLSKLDLGYN NLQGHIPPNF WNLQELIILN VGHNNLQGAI PEIGTLKHLT TLDLSSNMLT GQIPDSLGQC YDLVSLQMDQ
0601: NSLIGNIPAT FGNLSSLSML NLSHNNLSGN IPTVLNTLKF LNSLDLSHNH LQGEIPIYGV FDNATAVSLE DNWGLCGGAV FFHMASCKTI SKQSERRNRL
0701: IKVLIPIFGF MLVILLVYLL LLEKKMRRRT DDTSTSLGEN FMKVSYADLA QATANFSESN LVGRGGYGSV YRGKLKESKV DVAVKVFDLE MHGAEKSFLK
0801: ECEALRSIQH RNLLPILTAC STVDSTGNVF KALVYEFMPN GNLDTWLHPR EDGKAHKHLS LAQRLDIAVN MADALDYLHH DCGRPTIHCD LKPSNILLDG
0901: DMTALLGDFG IASFYQDSWS TSTSSMSSSS VGVKGTIGYI APEYAGGGRR ASTTGDVYGF GIILLEMMTG KRPTDPMFKD GVSIVDFVDS NFPHEIVHVI
1001: DVNLSEDSGV DITQANKASE NYVRECLVSM LQLALSCTHP VPSERMNMKE VASKIHAIKT SYVGRKTEER PSLE

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.