Factsheet for TraesCS3D01G060500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 4
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G060000.1	Wheat	cytosol	20.27	80.18
TraesCS3A01G060200.1	Wheat	plasma membrane	78.84	78.15
TraesCS3B01G072800.1	Wheat	mitochondrion	67.71	74.42
TraesCS6D01G000800.2	Wheat	mitochondrion, plastid	68.93	70.9
TraesCS4D01G003300.1	Wheat	plasma membrane	72.49	66.02
TraesCS3D01G060300.1	Wheat	plasma membrane	72.49	64.2
TraesCS3D01G003700.1	Wheat	cytosol	45.32	60.21
TraesCS4D01G081700.1	Wheat	cytosol, nucleus, peroxisome	51.78	54.9
TraesCS4D01G107000.1	Wheat	plasma membrane	60.02	53.16
TraesCS4D01G106900.1	Wheat	plasma membrane	60.02	53.1
TraesCS6D01G205900.1	Wheat	plasma membrane	40.98	44.5
TraesCS4D01G106600.1	Wheat	vacuole	31.63	43.69
TraesCS2D01G474300.1	Wheat	plasma membrane	36.41	43.43
TraesCS7D01G144900.1	Wheat	plasma membrane	43.88	38.97
TraesCS2D01G475300.1	Wheat	plasma membrane	39.76	37.34
TraesCS6D01G206100.1	Wheat	plasma membrane	40.42	35.21
EES08077	Sorghum	plasma membrane, vacuole	19.49	34.18
TraesCS6D01G206000.1	Wheat	plasma membrane	41.54	33.88
Bra018128.1-P	Field mustard	plasma membrane	39.09	33.75
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	20.16	33.71
PGSC0003DMT400031158	Potato	plasma membrane	35.86	33.58
CDY00454	Canola	plasma membrane	36.41	33.13
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	37.75	33.11
AT3G47090.1	Thale cress	plasma membrane	36.86	32.8
Bra015204.1-P	Field mustard	plasma membrane	36.53	32.54
Bra005562.1-P	Field mustard	plasma membrane	36.75	32.16
Bra029191.1-P	Field mustard	plasma membrane	34.63	32.03
KRH76431	Soybean	plasma membrane	27.51	31.95
CDX71113	Canola	plasma membrane	23.72	31.05
TraesCS2D01G067800.1	Wheat	plasma membrane, plastid	35.41	30.72
Bra014313.1-P	Field mustard	cytosol	24.39	30.29
TraesCS2D01G013100.1	Wheat	plasma membrane	34.19	29.86
CDY65706	Canola	extracellular, plasma membrane	22.27	29.07
CDY49183	Canola	extracellular, plasma membrane	22.16	28.92
TraesCS3D01G463800.1	Wheat	extracellular, plasma membrane	16.48	28.68
CDY60624	Canola	plasma membrane	20.71	26.96
TraesCS1D01G399900.1	Wheat	plastid	14.25	25.05
TraesCS7D01G006200.1	Wheat	plasma membrane	14.25	22.9
KRH73172	Soybean	extracellular, vacuole	8.35	22.59
TraesCS5D01G324100.1	Wheat	extracellular	8.13	21.99
TraesCS7D01G496400.1	Wheat	extracellular	8.02	20.22
TraesCS6D01G385100.1	Wheat	extracellular, mitochondrion, plastid, vacuole	8.35	19.74
TraesCS6D01G385200.1	Wheat	mitochondrion	8.24	19.02
TraesCS6D01G205800.1	Wheat	extracellular	1.11	7.46
TraesCS6D01G385000.1	Wheat	mitochondrion	0.45	3.05

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR43887	PANTHER:PTHR43887:SF9	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G060500
EnsemblPlants:TraesCS3D01G060500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:26301162..26303954

Molecular Weight (calculated)

97254.3 Da

IEP (calculated)

7.260

GRAVY (calculated)

0.087

Length

898 amino acids

Sequence
(BLAST)

001: MHRLETLHLN RNTLQGRIPS FANCSKLKEL DVSVNNLVGQ FPGDLPPHLH MLQVSFNNLT GIIPASLGNI TTLVFISCAH NRIKGNIPSE FAGLPGLQYL
101: YAGANQLTSR FPQAILNVST LIGLGLTLNG LSGELPPNLC TSLANLRILT LGGNLFLGHI PSSFTNASNL SVIDLSTNNF TRLVPTTMSK LTKLSMLNLE
201: NNQLQAHSGE DWEFLDSLGN CTERQILSMS VNCLSGHVPS SIANLSNKLQ QTLYLGENQL SGNFPSGIAN LHNLVAVSVG GNHFTGIVPE WIGTLKNLQQ
301: VDLAANFFTG VIPSSLSNLS QLGQLYVASN QFIGHIPKSF GNFPRLQYLD TASNNLHGRV PMEIFRIPSI IAIDLSFNNL DGQLPTNIGN AKQLVHLVLS
401: SNKLSGDIPN TLGDCGSLEY IELDSNIFSG SIPTSLGSIR GLKVLNISAN NLTGSIPTSL GNLQVLEKLD LSFNHLNGEV PTKGIFKNAT AVQIDGNQGL
501: CGGVPELHIL ACFVMPPDSI RNKKSLVLKV VIPIASMVSI VIVIFCFFLR GGKHKRKSIS LPSFSTKFPM VSFNDLARAT QGFSVSNLIG RGRYSSVYQG
601: KLVEDENEVA VKVFNLETRG AQKSFISECN ALRNVRHRSL VPIITVCSSI DSSGNDFKAL VYELMPRGDL HKLLYSTPDY EGSSDLNLIT IGQRISIVVD
701: VADALEYLHH NNQEALVHCD LKPSNILLND NMTAHVGDFG LARFKVGSTT SSHGNSSSIA VMGTIGYTAP EYAEGGQVST AADVYSFGVV LLEIFIRRRP
801: TDDMFKDGLS IVKFTEASFP DRVSVIFDPQ LLKELDETPI AFKEKHVHCL LSVLNVGLCC TKTPPGERIN MQEVAAKLHG IKDAYLRSSA VASVAVPE

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.