Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G474400.1 | Wheat | cytosol | 46.86 | 44.73 |
| TraesCS4A01G310800.1 | Wheat | plastid | 30.67 | 43.87 |
| TraesCS3A01G060900.1 | Wheat | plasma membrane, plastid | 27.43 | 41.14 |
| TraesCS4A01G232200.1 | Wheat | cytosol, plastid | 59.05 | 40.84 |
| TraesCS3A01G060000.1 | Wheat | cytosol, peroxisome, plastid | 64.0 | 39.58 |
| TraesCS4A01G206000.1 | Wheat | plasma membrane | 67.24 | 34.85 |
| TraesCS3A01G060100.1 | Wheat | plasma membrane | 63.05 | 32.74 |
| TraesCS1A01G391700.1 | Wheat | mitochondrion | 34.48 | 32.21 |
| Os11t0172150-00 | Rice | plasma membrane | 60.57 | 31.36 |
| TraesCS3A01G007200.1 | Wheat | plasma membrane | 60.76 | 31.31 |
| TraesCS3A01G060200.1 | Wheat | plasma membrane | 51.43 | 29.8 |
| TraesCS2A01G496000.1 | Wheat | plasma membrane | 48.76 | 28.51 |
| VIT_18s0001g15800.t01 | Wine grape | cytosol, peroxisome | 28.95 | 28.31 |
| TraesCS2A01G475400.1 | Wheat | cytosol, nucleus, vacuole | 16.76 | 26.91 |
| TraesCS2A01G359700.1 | Wheat | plasma membrane | 49.14 | 25.57 |
| TraesCS3A01G061000.1 | Wheat | cytosol | 22.1 | 23.11 |
| CDX71113 | Canola | plasma membrane | 28.95 | 22.16 |
| TraesCS1A01G337300.1 | Wheat | plasma membrane | 42.29 | 21.81 |
| PGSC0003DMT400031158 | Potato | plasma membrane | 38.86 | 21.27 |
| PGSC0003DMT400013987 | Potato | cytosol, nucleus, plasma membrane | 39.81 | 20.41 |
| TraesCS6A01G228900.1 | Wheat | plasma membrane | 43.81 | 20.28 |
| KRH76431 | Soybean | plasma membrane | 29.52 | 20.05 |
| CDY00454 | Canola | plasma membrane | 37.52 | 19.96 |
| AT3G47090.1 | Thale cress | plasma membrane | 38.29 | 19.92 |
| Bra015204.1-P | Field mustard | plasma membrane | 37.52 | 19.54 |
| Bra018128.1-P | Field mustard | plasma membrane | 38.29 | 19.33 |
| Bra005562.1-P | Field mustard | plasma membrane | 36.57 | 18.71 |
| Bra029191.1-P | Field mustard | plasma membrane | 34.48 | 18.64 |
| CDY49183 | Canola | extracellular, plasma membrane | 24.19 | 18.46 |
| CDY65706 | Canola | extracellular, plasma membrane | 23.62 | 18.02 |
| Bra014313.1-P | Field mustard | cytosol | 24.57 | 17.84 |
| TraesCS1A01G169700.1 | Wheat | plasma membrane, vacuole | 20.19 | 15.3 |
| CDY60624 | Canola | plasma membrane | 19.62 | 14.93 |
| TraesCS7A01G018700.1 | Wheat | plastid | 13.52 | 14.73 |
| TraesCS4A01G489700.1 | Wheat | plasma membrane | 10.86 | 11.09 |
| TraesCS1A01G391800.1 | Wheat | mitochondrion | 10.29 | 11.04 |
| TraesCS5A01G317700.1 | Wheat | extracellular | 5.9 | 9.34 |
| TraesCS7A01G508200.1 | Wheat | extracellular | 5.52 | 8.15 |
| KRH73172 | Soybean | extracellular, vacuole | 4.0 | 6.33 |
| TraesCS6A01G401200.1 | Wheat | extracellular, mitochondrion, plastid, vacuole | 4.0 | 5.54 |
| TraesCS4A01G489900.1 | Wheat | extracellular, plasma membrane | 0.0 | 0.0 |
| TraesCS6A01G400700.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.510.10 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | MapMan:50.2.7 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00069 | PFAM:PF00560 | PFAM:PF13855 | PRINTS:PR00019 |
| ScanProsite:PS00107 | PFscan:PS50011 | PANTHER:PTHR43887 | PANTHER:PTHR43887:SF9 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00365 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G419000 |
| EnsemblPlants:TraesCS6A01G419000.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:616776394..616778541
Molecular Weight (calculated)
58178.4 Da
IEP (calculated)
7.621
GRAVY (calculated)
-0.038
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSLANCTQL QIFSIASNFL EGHVPASLGI LSSQLDTLYL SENKLSGSFP SGIENLTNLT RLSLYNNRFT GEIPEWLGCL KKLQTIWLYQ NNFTGFLPTS
101: LSNLSQLGQL LLRSNKFGGL IPPGLGNLQM LQHLDISNNS LHGTVPKEIF GIPTIFLIDL SFNNLDGRLP TEIGNAKQLS YLSLSTNKLS GDIPNTLGNC
201: ESLKYLEQLD LSFNHLEGEV PTEGIFKNAT AVRIHGDRRL CGGVLELHLP ACPDMPSKST NHKPYCTQSS DPLVIIVLIA MVILVLLFWR GKHKRKSLVL
301: PSFGRQFPKV SFSDIARATQ GFATANIIGR GRYGSVYQGK LFQDGSDVAI KVFNLETRGS QKSFISECNA LRNVRHRNLV PILTTCSSID SNGNDFKALV
401: YEFMPGGMCN GRSCIDYSFG IVLLEIFLRK RPTDDMFKDG LDIVKFVEVN YPCGISQIVD LDLLQDEVEF PQGSRSAMKA KDLNCLISVL NIGLCCTKVS
501: PNERLDMHEV AARLHGIKEA YLREN
101: LSNLSQLGQL LLRSNKFGGL IPPGLGNLQM LQHLDISNNS LHGTVPKEIF GIPTIFLIDL SFNNLDGRLP TEIGNAKQLS YLSLSTNKLS GDIPNTLGNC
201: ESLKYLEQLD LSFNHLEGEV PTEGIFKNAT AVRIHGDRRL CGGVLELHLP ACPDMPSKST NHKPYCTQSS DPLVIIVLIA MVILVLLFWR GKHKRKSLVL
301: PSFGRQFPKV SFSDIARATQ GFATANIIGR GRYGSVYQGK LFQDGSDVAI KVFNLETRGS QKSFISECNA LRNVRHRNLV PILTTCSSID SNGNDFKALV
401: YEFMPGGMCN GRSCIDYSFG IVLLEIFLRK RPTDDMFKDG LDIVKFVEVN YPCGISQIVD LDLLQDEVEF PQGSRSAMKA KDLNCLISVL NIGLCCTKVS
501: PNERLDMHEV AARLHGIKEA YLREN
0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.