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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plasma membrane: 18557835
vacuole: 18557835
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052022_P002 Maize plasma membrane 92.31 87.46
EES05959 Sorghum cytosol, peroxisome, plasma membrane 94.0 87.38
TraesCS6A01G360500.1 Wheat peroxisome 92.76 86.59
TraesCS6D01G344000.1 Wheat peroxisome 92.76 86.32
TraesCS6B01G393400.1 Wheat peroxisome 84.5 85.76
Os06t0181500-02 Rice plasma membrane 78.62 79.98
HORVU0Hr1G017350.1 Barley mitochondrion, peroxisome, plastid 93.44 79.5
Os04t0656100-01 Rice plasma membrane 82.01 76.24
GSMUA_Achr3P13380_001 Banana cytosol, peroxisome, plasma membrane 78.73 75.32
Os12t0638700-01 Rice plasma membrane 79.19 73.22
Os07t0191200-01 Rice plasma membrane 78.28 72.31
Os03t0689300-01 Rice plasma membrane 78.17 72.28
Os05t0319800-01 Rice plasma membrane 81.67 71.2
Os08t0241800-01 Rice plasma membrane 23.98 68.39
Os03t0100800-01 Rice plasma membrane 72.96 66.49
Os03t0183900-01 Rice peroxisome 39.25 64.5
VIT_15s0048g00140.t01 Wine grape cytosol 19.68 54.21
Os11t0485200-01 Rice extracellular 30.66 29.36
Os03t0107100-00 Rice mitochondrion 11.88 25.06
Protein Annotations
KEGG:00190+3.6.3.6Gene3D:1.20.1110.10Gene3D:2.60.120.1500MapMan:24.1.2.3.1Gene3D:3.40.1110.10UniProt:A0A0P0VQP6
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfProteinID:BAS81374.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811
GO:GO:0008150GO:GO:0008152GO:GO:0008553GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0046872GO:GO:0120029InterPro:HAD-like_sfInterPro:IPR023299
EnsemblPlantsGene:Os02g0797300EnsemblPlants:Os02t0797300-01InterPro:P-type_ATPase_IIIAPFAM:PF00122PFAM:PF00702PRINTS:PR00119
PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF25InterPro:P_typ_ATPaseSUPFAM:SSF56784
SUPFAM:SSF81653SUPFAM:SSF81665SignalP:SignalP-TMTIGRFAMs:TIGR01494TIGRFAMs:TIGR01647TMHMM:TMhelix
UniParc:UPI0000DF08C2SEG:seg::::
Description
H+-ATPASE 6Similar to Plasma membrane H+-ATPase. (Os02t0797300-01)
Coordinates
chr2:+:33931818..33936154
Molecular Weight (calculated)
96787.7 Da
IEP (calculated)
6.665
GRAVY (calculated)
0.111
Length
884 amino acids
Sequence
(BLAST)
001: MWNPLSWVME AAAIMAIVLA NGGGRPPDWQ DFVGIVVLLV INSTISFIEE NNAGNAAAAL MAGLAPKTKV LRDGKWQEQD ASILVPGDII SIKLGDIIPA
101: DARLLEGDPL KVDQAALTGE SMPVNKHAGQ GVFSGSTVKQ GEIEAVVIAT GVHTFFGKAA HLVDSTNNIG HFQLVLTAIG NFCIISIGVG MIIEIIVMYP
201: IQHRAYRDGI DNLLVLLIGG IPIAMPTVLS VTMAIGSHRL SQQGAITKRM TAIEEMAGMD VLCSDKTGTL TLNKLTVDKT LIEVYGRGLD KDSVLLYAAR
301: ASRVENQDAI DTCIVGMLAD PKEARAGIKE VHFLPFNPVE KRTAITYIDG NGEWHRISKG APEQIIELCK MSKDAEKKVH TLIDQYADRG LRSLGVSYQK
401: VPEKSKESEG EPWQFVGLLP LFDPPRHDSA ETIRRALHLG VNVKMITGDQ LAIGKETARR LGMGTNMYPS TTLLGDKSSE MSGLPIDELI EKADGFAGVF
501: PEHKYEIVKR LQDRKHICGM TGDGVNDAPA LKKADIGIAV DDATDAARSA SDIVLTEPGL SVIVSAVLTS RAIFQRMKNY TIYAVSITIR IVLGFMLVAL
601: LWKFDFAPFM VLIIAILNDG TIMTISKDRV KPSPTPDSWK LKEIFATGIV LGTYMALITA LFFYLAHDTD FFTETFGVRS IKTNEKEMMA ALYLQVSIIS
701: QALIFVTRSR SWSFVERPGA LLVIAFLAAQ LVATCIAVYA EWEFCKMQGI GWGWGGAIWA FSVVTYFPLD VLKFIIRYAL SGRAWNNINN KTAFVNKNDY
801: GKGEREAQWA TAQRTLHGLN QSSTSSDLFN DKTGYRELSE IAEQAAKRAE VARLRELHTL KGHVESVVKL KGLDIDTIQQ SYTV
Best Arabidopsis Sequence Match ( AT1G80660.1 )
(BLAST)
001: MAGNKDSSWD DIKNEGIDLE KIPIEEVLTQ LRCTREGLTS DEGQTRLEIF GPNKLEEKKE NKVLKFLGFM WNPLSWVMEL AAIMAIALAN GGGRPPDWQD
101: FVGITVLLII NSTISFIEEN NAGNAAAALM AGLAPKTKVL RDGKWSEQEA AILVPGDIIS IKLGDIVPAD GRLLDGDPLK IDQSALTGES LPVTKHPGQE
201: VYSGSTCKQG ELEAVVIATG VHTFFGKAAH LVDSTNQEGH FQKVLTAIGN FCICSIAIGM LIEIVVMYPI QKRAYRDGID NLLVLLIGGI PIAMPTVLSV
301: TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDKSM VEVFVKDLDK DQLLVNAARA SRVENQDAID ACIVGMLGDP REAREGITEV
401: HFFPFNPVDK RTAITYIDAN GNWHRVSKGA PEQIIELCNL REDASKRAHD IIDKFADRGL RSLAVGRQTV SEKDKNSPGE PWQFLGLLPL FDPPRHDSAE
501: TIRRALDLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS ALLGQDKDES IASLPVDELI EKADGFAGVF PEHKYEIVKR LQEMKHICGM TGDGVNDAPA
601: LKRADIGIAV ADATDAARSA SDIVLTEPGL SVIVSAVLTS RAIFQRMKNY TIYAVSITIR IVMGFMLLAL IWKFDFSPFM VLIVAILNDG TIMTISKDRV
701: KPSPLPDSWK LKEIFATGVV LGTYLAVMTV VFFWAAESTD FFSAKFGVRS ISGNPHELTA AVYLQVSIVS QALIFVTRSR SWSYVERPGF WLISAFFMAQ
801: LIATLIAVYA NWNFARIRGI GWGWAGVIWL YSIVFYIPLD ILKFIIRYSL SGRAWDNVIE NKTAFTSKKD YGKGEREAQW AQAQRTLHGL QPAQTSDMFN
901: DKSTYRELSE IADQAKRRAE VARLRERHTL KGHVESVVKQ KGLDIEAIQQ HYTL
Arabidopsis Description
AHA9ATPase 9, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q42556]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.