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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:plastid
YLoc:plasma membrane
plasma membrane: 28056797
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER88725 Sorghum peroxisome 87.18 92.76
Zm00001d036728_P001 Maize cytosol 63.81 91.0
TraesCS7A01G510800.1 Wheat plasma membrane 80.37 85.88
TraesCS7D01G500200.1 Wheat peroxisome 80.28 85.77
Zm00001d046560_P001 Maize cytosol, peroxisome, plasma membrane 56.9 85.74
TraesCS7B01G421700.1 Wheat plasma membrane 79.88 85.35
HORVU7Hr1G114340.1 Barley peroxisome, plasma membrane 80.57 85.19
Os02t0797300-01 Rice plasma membrane 71.2 81.67
Os04t0656100-01 Rice plasma membrane 75.35 80.34
GSMUA_Achr3P13380_001 Banana cytosol, peroxisome, plasma membrane 73.18 80.3
Os06t0181500-02 Rice plasma membrane 66.37 77.45
Os12t0638700-01 Rice plasma membrane 72.98 77.41
Os03t0689300-01 Rice plasma membrane 72.98 77.41
Os07t0191200-01 Rice plasma membrane 72.39 76.7
Os03t0100800-01 Rice plasma membrane 68.74 71.86
Os08t0241800-01 Rice plasma membrane 21.01 68.71
Os03t0183900-01 Rice peroxisome 34.91 65.8
VIT_15s0048g00140.t01 Wine grape cytosol 18.15 57.32
Os11t0485200-01 Rice extracellular 28.6 31.42
Os03t0107100-00 Rice mitochondrion 11.54 27.92
Protein Annotations
KEGG:00190+3.6.3.6Gene3D:1.20.1110.10MapMan:24.1.2.3.1Gene3D:3.40.1110.10InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfProteinID:BAF17100.1ProteinID:BAS93349.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811
GO:GO:0008150GO:GO:0008152GO:GO:0008553GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0046872GO:GO:0120029InterPro:HAD-like_sfInterPro:IPR023299
EnsemblPlantsGene:Os05g0319800EnsemblPlants:Os05t0319800-01InterPro:P-type_ATPase_IIIAPFAM:PF00122PFAM:PF00690PFAM:PF00702
PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF13InterPro:P_typ_ATPase
UniProt:Q0DJ73SMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01647TMHMM:TMhelixUniParc:UPI0000E12440SEG:seg::
Description
Similar to Plasma membrane H+ ATPase (EC 3.6.3.6). (Os05t0319800-01);Similar to Plasma membrane H+ ATPase. (Os05t0319800-02)
Coordinates
chr5:-:14848337..14852841
Molecular Weight (calculated)
111406.0 Da
IEP (calculated)
7.762
GRAVY (calculated)
0.092
Length
1014 amino acids
Sequence
(BLAST)
0001: LGTLLRGGNH VGLTGGSQEG ERRPRQCSSS FRQYCVHPCV RVIRVSLWRC WLVGWLQESI PIQEVFAVLK SSPQGLTSAD GNGRLEIFGR NKLEEKKESK
0101: LLKFLGFMWN PLSWVMEAAA IMAIALANGG GRPPDWQDFV GIVTLLFINS TISFIEENNA GNAAAALMAS LAPQTKLLRD GKWSEQDAAI LVPGDIISIK
0201: LGDIIPADAR LMEGDPLKID QSALTGESLP VNKMPGDSIY SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIAAGMLI
0301: EIIVMYPIQH RQYRDGIDNL LVLLIGGIPI AMPTVLSVTM AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLTVDKNMIE PFVKDLDKDA
0401: IVLYAARASR TENQDAIDAS IVGMLADPSE ARAGIQEVHF MPFNPVDKRT AITYIDTKDG SWHRISKGAP EQIIELCRLR DDVSRRVHAI IDKFADRGLR
0501: SLAVARQKVP EGSKDAPGTP WQFLAVLPLF DPPRHDSSET IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSS LLKDGDTGGL PVDELIEKAD
0601: GFAGVFPEHK YEIVRRLQER KHICGMTGDG VNDAPALKKA DIGIAVADAT DAARGASDIV LTEPGLSVII SAVLTSRAIF QRMKNYTIYA VSITIRVVLG
0701: FLLLALIWRF DFAPFMVLII AILNDGTIMT ISKDRVKPSP LPDAWRLQEI FATGIVLGTY LALATVLFFW AVRDTDFFTV TTHHPTSHAS PPRALTPCVC
0801: GQRTFGVHPI GGSTEELMAA VYLQVSIISQ ALIFVTRARS WFFVERPGLL LVGAFLIAQL MATLIAVYAN WPFAKMKGIG WSWGMVIWLF SIVTFFPLDI
0901: FKFAIRYFLS GKAWNNAFDN KTAFANELDY GKSKREAQWA IAQRSLHGLQ QAETSTALFD DNKDYLELSE IAEQAKRRAE IARLRELHTL KGHVESVVKL
1001: KGLDIDTIQN HYTV
Best Arabidopsis Sequence Match ( AT2G07560.1 )
(BLAST)
001: MAADISWDEI KKENVDLEKI PVDEVFQQLK CSREGLSSEE GRNRLQIFGA NKLEEKVENK FLKFLGFMWN PLSWVMEAAA IMAIVLANGG GRPPDWQDFV
101: GITCLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GRWGEQEAAI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP ATKHQGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIGIGMLI EIIIMYPIQH RKYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLTVDKNLIE VFSKDVDKDY VILLSARASR VENQDAIDTS IVNMLGDPKE ARAGITEVHF
401: LPFNPVEKRT AITYIDTNGE WHRCSKGAPE QIIELCDLKG ETKRRAHEII DKFAERGLRS LGVARQRVPE KDKESAGTPW EFVGLLPLFD PPRHDSAETI
501: RRALDLGVNV KMITGDQLAI GKETGRRLGM GTNMYPSSSL LENKDDTTGG VPVDELIEKA DGFAGVFPEH KYEIVRKLQE RKHIVGMTGD GVNDAPALKK
601: ADIGIAVDDA TDAARSASDI VLTEPGLSVI VSAVLTSRAI FQRMKNYTIY AVSITIRIVL GFMLVALIWE FDFSPFMVLI IAILNDGTIM TISKDRVKPS
701: PIPDSWKLKE IFATGVVLGT YMALVTVVFF WLAHDTTFFS DKFGVRSLQG KDEELIAVLY LQVSIISQAL IFVTRSRSWS FVERPGLLLL IAFFVAQLIA
801: TLIATYAHWE FARIKGCGWG WCGVIWIYSI VTYIPLDILK FITRYTLSGK AWNNMIENRT AFTTKKDYGR GEREAQWALA QRTLHGLKPP ESMFEDTATY
901: TELSEIAEQA KKRAEVARLR EVHTLKGHVE SVVKLKGLDI DNLNQHYTV
Arabidopsis Description
AHA6ATPase 6, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SH76]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.