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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
YLoc:cytosol
nucleus: 18203134
msms PMID: 18203134 doi
G Li, BR Nallamilli, F Tan, Z Peng
Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G489000.1 Wheat cytosol 73.31 51.55
TraesCSU01G115700.3 Wheat cytosol 76.3 43.32
Os12t0616000-01 Rice cytosol 39.4 43.28
Zm00001d027337_P001 Maize cytosol 75.67 43.27
VIT_18s0001g07800.t01 Wine grape cytosol 59.03 42.82
TraesCS5A01G556500.2 Wheat cytosol, mitochondrion 76.3 41.65
TraesCS4B01G398000.1 Wheat cytosol 75.98 41.23
HORVU4Hr1G088880.7 Barley cytosol 73.47 41.2
KXG40352 Sorghum cytosol, mitochondrion, plastid 77.08 40.95
VIT_00s0218g00050.t01 Wine grape nucleus 59.03 35.91
Bra038507.1-P Field mustard cytosol 58.08 35.34
CDY13741 Canola cytosol 57.93 35.18
CDX76903 Canola cytosol 57.93 35.08
KRH39483 Soybean cytosol 57.3 34.21
KRH74459 Soybean cytosol 56.51 33.9
PGSC0003DMT400041748 Potato cytosol 58.08 33.58
AT2G22610.3 Thale cress cytosol 56.67 33.3
Os07t0105700-01 Rice cytosol 21.82 32.86
Solyc11g010920.1.1 Tomato cytosol 57.3 31.99
Os02t0229600-00 Rice plasma membrane 27.32 31.13
GSMUA_Achr1P04040_001 Banana cytosol 62.17 30.77
Os06t0554700-01 Rice cytosol 21.35 29.12
Os03t0301800-01 Rice cytosol 23.08 28.82
Os05t0397900-01 Rice cytosol 35.48 26.9
Os01t0243100-01 Rice cytosol 18.68 25.16
Os12t0547500-01 Rice cytosol 29.04 19.39
Os04t0629700-02 Rice cytosol 22.92 17.98
Os01t0744000-01 Rice cytosol 27.32 17.92
Os05t0521300-04 Rice cytosol 27.63 17.39
Os11t0672400-00 Rice plasma membrane 21.66 15.45
Os04t0666900-01 Rice cytosol 22.14 11.73
Os04t0467901-00 Rice cytosol 10.05 11.72
KRH12947 Soybean cytosol 0.0 0.0
Protein Annotations
MapMan:20.1.3.12Gene3D:3.40.850.10ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774
GO:GO:0003777GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0005874GO:GO:0007018GO:GO:0008017
GO:GO:0008150GO:GO:0009904GO:GO:0009987GO:GO:0016043GO:GO:0016787InterPro:IPR001752
InterPro:IPR036961InterPro:Kinesin-like_famInterPro:Kinesin_motor_CSInterPro:Kinesin_motor_domInterPro:Kinesin_motor_dom_sfEnsemblPlantsGene:Os03g0114000
EnsemblPlants:Os03t0114000-01InterPro:P-loop_NTPasePFAM:PF00225PRINTS:PR00380ScanProsite:PS00411PFscan:PS50067
PANTHER:PTHR24115PANTHER:PTHR24115:SF339SMART:SM00129SUPFAM:SSF52540UniParc:UPI0000E11ED8SEG:seg
Description
Similar to Kinesin. (Os03t0114000-01)
Coordinates
chr3:+:788208..791569
Molecular Weight (calculated)
71160.3 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.768
Length
637 amino acids
Sequence
(BLAST)
001: SSGYKCAVDF DGAKDGDIAI VNGGAAKKTF KFDRVYMPTD NQADVYADAS PLVTSVLDGY NVCIFAYGQT GTGKTFTMEG TERNRGVNYR TLEELFKIAE
101: ERKETVTYSI SVSVLEVYNE QIRDLLASSP SSKKLEIKQA SEGSHHVPGI VEAKVENIKE VWDVLQAGSN ARAVGSNNVN EHSSRSHCML CIMVRAENLM
201: NGECTRSKLW LVDLAGSERL AKTDVQGERL KEAQNINRSL SALGDVISAL ATKNSHIPYR NSKLTHLLQD SLGGDSKALM FVQISPSNND VSETLSSLNF
301: ASRVRRIELG PAKKQVDTAE LQKVKQMLER AKQDIRLKDD SLRKLEDNCQ NLENKAKGKE QFYKNLQEKV KELESQLDSK MHSQITSEKQ QNELFGKLKE
401: KEEMCTTLQQ KIAEESEHKL RLQQQSESEI KELELKLKEQ EHHRSVAESK AMEIGQELLE TQRTEAMLQI KPRDLENNLQ ERTTLQDTNM ILDSTNCMRV
501: ASTPGEAKAH LLTREEAMSE KEQHILRSSD SMNKKVTNNS SIVGAPEVVN EKKRKGDARN SSIGGELENQ PVGSQNASRK RSLQGEPRLK RKSTEPLKNP
601: GRVTATSKTA AATHKTGPVT RATRQQPAVN KTRGWVR
Best Arabidopsis Sequence Match ( AT2G22610.2 )
(BLAST)
0001: MDDVQIDDTF PVDLNGVTSL CSPEIPSFDF VSDETEKLEI GDTSIDDCDD ALGDSMVCDP NSRLVPTGLT RTNRTDETIM FINAGGDDSK VLDSELNISR
0101: DDYFEGGDVL RTEESIVEAG DFPFIYQSAR VGNFCYQLNN LLPGEYLIDF HFAEIINTNG PKGIRVFNVY VQDEKATEFD IFSVVGANRP LLLVDLRVMV
0201: MDDGLIRVRF EGINGSPVVC GICLRKAPQV SVPRTSQDFI KCENCATEIE ISPTRKRLMR AKAHDKYEKK IAELSERYEH KTNECHEAWM SLTSANEQLE
0301: KVMMELNNKI YQARSLDQTV ITQADCLKSI TRKYENDKRH WATAIDSLQE KIEIMKREQS QLSQEAHECV EGIPELYKMV GGVQALVSQC EDLKQKYSEE
0401: QAKRKELYNH IQETKGNIRV FCRCRPLNTE ETSTKSATIV DFDGAKDGEL GVITGNNSKK SFKFDRVYTP KDGQVDVFAD ASPMVVSVLD GYNVCIFAYG
0501: QTGTGKTFTM EGTPQNRGVN YRTVEQLFEV ARERRETISY NISVSVLEVY NEQIRDLLAT SPGSKKLEIK QSSDGSHHVP GLVEANVENI NEVWNVLQAG
0601: SNARSVGSNN VNEHSSRSHC MLSIMVKAKN LMNGDCTKSK LWLVDLAGSE RLAKTDVQGE RLKEAQNINR SLSALGDVIY ALATKSSHIP YRNSKLTHLL
0701: QDSLGGDSKT LMFVQISPSE HDVSETLSSL NFATRVRGVE LGPARKQVDT GEIQKLKAMV EKARQESRSK DESIKKMEEN IQNLEGKNKG RDNSYRSLQE
0801: KNKDLQNQLD SVHNQSEKQY AQLQERLKSR DEICSNLQQK VKELECKLRE RHQSDSAANN QKVKDYENKL KESEGNSLVW QQKIKELEIK HKDEQSQEAV
0901: LLRQKIKELE MRLKEQEKHI QEMATTREFP EVANATPNEV KTCFKEDNFG NENMESNTNI LRTSNRLKTK RHDSLNLNEM TRKKRASRSG ETENNGDDPQ
1001: MKEKRIRKSD PPKVFSRVVR PTRTASGSSS QVPVAQKRVI KREQQEVPVV KERDSKKKIW SR
Arabidopsis Description
Di-glucose binding protein with Kinesin motor domain [Source:TAIR;Acc:AT2G22610]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.