Factsheet for Os11t0672400-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G032920.32	Barley	cytosol	75.92	66.02
TraesCS4D01G144800.1	Wheat	cytosol	75.59	65.41
TraesCS4A01G169700.2	Wheat	cytosol	75.14	65.15
TraesCS4B01G126400.1	Wheat	cytosol	74.8	64.79
KXG29090	Sorghum	cytosol	71.22	63.92
Os12t0547500-01	Rice	cytosol	59.57	55.77
Zm00001d007712_P003	Maize	plastid	64.39	52.13
Os03t0301800-01	Rice	cytosol	27.55	48.24
KRH69263	Soybean	cytosol	51.62	45.83
PGSC0003DMT400018808	Potato	cytosol	51.51	45.77
VIT_07s0005g00940.t01	Wine grape	cytosol	52.3	45.56
Solyc06g009780.2.1	Tomato	nucleus	51.18	45.47
KRH31841	Soybean	cytosol	51.4	45.36
VIT_14s0060g01570.t01	Wine grape	cytosol	51.62	45.33
KRG96486	Soybean	cytosol	50.84	44.99
Solyc01g100120.2.1	Tomato	cytosol	49.94	43.94
PGSC0003DMT400063759	Potato	cytosol	49.83	43.93
KRH68226	Soybean	cytosol	50.5	43.83
Solyc09g075480.2.1	Tomato	nucleus	48.82	43.6
CDY53341	Canola	cytosol	44.46	43.15
AT2G47500.1	Thale cress	cytosol	47.37	43.03
CDY57719	Canola	cytosol	47.14	42.78
Bra036604.1-P	Field mustard	cytosol	37.63	42.69
Bra004451.1-P	Field mustard	cytosol	44.79	42.64
CDX80111	Canola	cytosol	47.14	42.53
KRH33856	Soybean	cytosol	46.7	42.25
CDY19745	Canola	cytosol	44.34	42.22
KRG96746	Soybean	cytosol	48.38	42.15
KRH68465	Soybean	cytosol	47.82	41.9
AT5G27000.1	Thale cress	cytosol	45.8	41.44
CDX88251	Canola	cytosol	43.23	40.67
CDX80606	Canola	cytosol	44.9	40.38
Bra009929.1-P	Field mustard	cytosol	42.55	40.25
CDY31108	Canola	cytosol	43.56	39.9
Bra030760.1-P	Field mustard	cytosol	41.77	39.1
CDY32155	Canola	cytosol	43.34	38.93
AT1G09170.5	Thale cress	cytosol	44.34	37.86
CDY67329	Canola	cytosol	34.15	37.2
Os02t0229600-00	Rice	plasma membrane	22.62	36.14
Os06t0554700-01	Rice	cytosol	17.81	34.05
Os04t0467901-00	Rice	cytosol	19.6	32.05
Os01t0744000-01	Rice	cytosol	32.25	29.66
Os01t0243100-01	Rice	cytosol	15.68	29.6
Os05t0521300-04	Rice	cytosol	32.36	28.56
Os07t0105700-01	Rice	cytosol	12.88	27.19
Os12t0616000-01	Rice	cytosol	14.11	21.72
Os03t0114000-01	Rice	cytosol, nucleus	15.45	21.66
Os05t0397900-01	Rice	cytosol	16.69	17.74
Os04t0629700-02	Rice	cytosol	15.79	17.36
Os04t0666900-01	Rice	cytosol	16.35	12.15

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005874	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EnsemblPlantsGene:Os11g0672400	EnsemblPlants:Os11t0672400-00	InterPro:P-loop_NTPase
PFAM:PF00225	PFAM:PF00307	PFAM:PF16796	PRINTS:PR00380	PFscan:PS50021	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF438	SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540
UniParc:UPI0003938770	InterPro:Vik1/Cik1_MT-bd	SEG:seg	:	:	:

Description

Calponin homology domain domain containing protein. (Os11t0672400-00)

Coordinates

chr11:-:27159075..27165177

Molecular Weight (calculated)

97447.0 Da

IEP (calculated)

6.479

GRAVY (calculated)

-0.549

Length

893 amino acids

Sequence
(BLAST)

001: MGSPEGEEAV VATAAVVEDG LRGNGDGGGG GVGEVVGVGR SIDMEWRKAE EAAIRRYEAA NWLRRVVGVV CGKDLAEEPS EEEFRLGLRN GIVLCNALNK
101: VQPGSVPKVV EAPSDSADGA ALCAYQYFEN VRNFLMGLQD LGLPTFEASD LEKGGKGVRV VDCVLSLRSF SESKQVGRSA PLKYGGILKP SMSGKHFIRK
201: NSEPFVKTMV RSYSAELLRD GVSLEQSLGL DFSLEHVERT TPDSIRMLVQ TMLSDKKPEE IPSLVESLLS RVIHEFERRT ANQNESVKHA LDPNDDKLLS
301: RADTPPEMES TCTCSTGNMD EEDHTSVSMK EEVSTAVLVN GENVVEHIQA KQTDKYFDQQ QKHIKDLKSN LATMKSGMEH IKLQYSEDLD KLGKHVHTLS
401: HAASGYHKVL EENRKLYNQI QDLRGNIRVY CRVRPFLPGK SGPKVLTEEG LGVNYRALND LFNIQAQRKD TFCYEISVQM IEIYNEQKGI AVPDANIVPV
501: TSTSDVIDLM NLGQKNRAVC STAMNDRSSR SHSCLTVHVQ GRDLTSRTVL RGCMHLVDLA GSERVDKSEV VGDRLKEAQH INKSLAALGD VIASLAQKNA
601: HVPYRNSKLT QLLQDSLAPE PDAIGESIST LKFAERVATV ELGAAKSNKE GGEVKELKEQ IACLKAALAK KDGETESIRS TQSSPDIYRM RMGSAPPAFR
701: NPMEEVGNLE TRSNGTPRQK KRNFELPDVE NDTSSWLDTS SQKEAALGEW VNNSQFGSSN SLLELGPDAT QDVVFYQRNS PEPQWSWAGS VATEDSDDFE
801: VTTSCSSEQD MVRPTSAPKA PGSANGSASI ARKAQPKGAK STDIRSTNPA KRAAPLQKKI NGPPSASTKN GKQLSLSAAD GKRAPNGKVS AKK

Best Arabidopsis Sequence Match ( AT1G09170.2 )
(BLAST)

001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIEVKG TRKLIHQTKQ IKLVNTFCSD YFMMCSEITC RVKVTLHLAL TYKD

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.