Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G144800.1 | Wheat | cytosol | 96.8 | 96.71 |
| TraesCS4A01G169700.2 | Wheat | cytosol | 96.41 | 96.5 |
| HORVU4Hr1G032920.32 | Barley | cytosol | 92.14 | 92.5 |
| Os11t0672400-00 | Rice | plasma membrane | 64.79 | 74.8 |
| KXG29090 | Sorghum | cytosol | 69.64 | 72.16 |
| Zm00001d007712_P003 | Maize | plastid | 63.63 | 59.47 |
| TraesCS5B01G099000.1 | Wheat | cytosol | 57.71 | 59.38 |
| TraesCS4B01G186700.1 | Wheat | cytosol | 50.63 | 52.3 |
| VIT_14s0060g01570.t01 | Wine grape | cytosol | 50.34 | 51.03 |
| PGSC0003DMT400018808 | Potato | cytosol | 49.66 | 50.95 |
| Solyc06g009780.2.1 | Tomato | nucleus | 49.56 | 50.85 |
| VIT_07s0005g00940.t01 | Wine grape | cytosol | 50.15 | 50.44 |
| KRH69263 | Soybean | cytosol | 49.18 | 50.4 |
| KRH31841 | Soybean | cytosol | 49.37 | 50.3 |
| KRG96486 | Soybean | cytosol | 49.18 | 50.25 |
| Solyc09g075480.2.1 | Tomato | nucleus | 48.21 | 49.7 |
| KRH68226 | Soybean | cytosol | 48.98 | 49.08 |
| Solyc01g100120.2.1 | Tomato | cytosol | 48.3 | 49.06 |
| CDY57719 | Canola | cytosol | 46.65 | 48.88 |
| PGSC0003DMT400063759 | Potato | cytosol | 48.01 | 48.86 |
| AT2G47500.1 | Thale cress | cytosol | 46.46 | 48.73 |
| CDX80111 | Canola | cytosol | 46.75 | 48.69 |
| Bra004451.1-P | Field mustard | cytosol | 44.23 | 48.61 |
| KRH33856 | Soybean | cytosol | 46.07 | 48.13 |
| KRG96746 | Soybean | cytosol | 47.53 | 47.8 |
| CDY53341 | Canola | cytosol | 42.48 | 47.61 |
| KRH68465 | Soybean | cytosol | 46.85 | 47.4 |
| CDY19745 | Canola | cytosol | 42.77 | 47.01 |
| AT5G27000.1 | Thale cress | cytosol | 43.84 | 45.8 |
| CDX80606 | Canola | cytosol | 43.84 | 45.52 |
| CDX88251 | Canola | cytosol | 41.71 | 45.31 |
| Bra009929.1-P | Field mustard | cytosol | 41.22 | 45.02 |
| CDY67329 | Canola | cytosol | 35.79 | 45.0 |
| CDY31108 | Canola | cytosol | 42.29 | 44.72 |
| Bra036604.1-P | Field mustard | cytosol | 34.04 | 44.6 |
| Bra030760.1-P | Field mustard | cytosol | 40.93 | 44.23 |
| CDY32155 | Canola | cytosol | 42.39 | 43.96 |
| AT1G09170.5 | Thale cress | cytosol | 42.58 | 41.97 |
| TraesCS2B01G348700.1 | Wheat | cytosol | 37.83 | 37.61 |
| TraesCS3B01G309000.1 | Wheat | cytosol | 33.07 | 35.08 |
| TraesCS3B01G196600.1 | Wheat | cytosol | 32.49 | 34.11 |
| TraesCS1B01G354200.2 | Wheat | cytosol | 33.27 | 30.79 |
| TraesCS7B01G271700.2 | Wheat | cytosol | 33.95 | 28.76 |
| TraesCS6B01G215900.1 | Wheat | cytosol | 32.98 | 24.43 |
| TraesCS2B01G505400.2 | Wheat | cytosol, plastid | 18.43 | 24.2 |
| TraesCS1B01G259800.1 | Wheat | cytosol | 19.88 | 23.73 |
| TraesCS2B01G342100.1 | Wheat | cytosol | 17.65 | 23.58 |
| TraesCS5B01G032700.1 | Wheat | nucleus | 19.59 | 20.72 |
| TraesCS4B01G398000.1 | Wheat | cytosol | 22.31 | 19.59 |
| TraesCS2B01G514800.1 | Wheat | cytosol | 17.85 | 15.06 |
Protein Annotations
| Gene3D:1.10.418.10 | MapMan:20.1.3.12 | Gene3D:3.40.850.10 | InterPro:CH-domain | InterPro:CH_dom_sf | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001715 | InterPro:IPR001752 | InterPro:IPR036872 | InterPro:IPR036961 | InterPro:Kinesin-like_fam |
| InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 | PFAM:PF00307 | PRINTS:PR00380 |
| PFscan:PS50021 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF438 | SMART:SM00033 | SMART:SM00129 |
| SUPFAM:SSF47576 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4B01G126400 | EnsemblPlants:TraesCS4B01G126400.1 | TIGR:cd01366 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:161552375..161558184
Molecular Weight (calculated)
111977.0 Da
IEP (calculated)
6.296
GRAVY (calculated)
-0.458
Length
1031 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPEREAVA ATAIVEDVLR MHGEGLGAGG GVGQVLVMGR NIDMAWRKAE VAAVRRNEAA SWLRRTVGVV CAKNLAEEPS EEEFRVGLRN GIILCNAVNK
0101: IQPGTVPKVV EVHSVSTIPS DGSALCAYQY FENVRNFLTG LQDLGLPTFE VSDLEKGGQG VRVVDCVLAL KSFAETKQLG KQSLFKHGGI VKPSMSAKCS
0201: VRKNEPFMKA MTRSHSAELL RDGVSLEQTL GLDCFLEPAE TITSDSIRML VQTILSDKKP EEVPLLVESL LSKVIHEFER RMANQNDLVK YTVDPNDSSS
0301: LSKTESSDTP QEMEATSTSD HGKMDEEDHE SVTNHVKTDE EDNSSVTNNE KMDDEDHNSV GSTGDVSAAV LVNGDSVAKD IQAKADIHFE LQKKQIQDMK
0401: SNLCTVKSGI EQFKLQYSED LAKLGNHLRT ISHAASGYHK VLEENRKLYN QIQDLRGNIR VYCRVRPFLP GKVSSSSSVA GIEDRTITLM TSSKQGKDAR
0501: KSFTFNRVFG PLATQAEIFV DMQPLVRSVL DGYNICIFAY GQTGSGKTFT MSGPKILTEE GLGVNYRALN DLFDIQAQRR DTFCYEISVQ MMEIYNEQVR
0601: DLLHSGPNKK LEIRNSSQNG IAVPDANRVP VASTSDVVDL MNLGQKNRAV CSTAMNDRSS RSHSCVTVHV QGQDLTSGTV LRGCMHLVDL AGSERVDKSE
0701: VVGDRLKEAQ HINKSLAALG DVIASLAQKS AHVPYRNSKL TQLLQDSLGG QAKTLMFVHI APEPDAIGES ISTLKFAERV ATVELGAAKT NKEGGEVKEL
0801: KEQIACLRAA LASKDGENES IRSTHSSPDI LRDIRISHAS PESGHPGEEA GCLEVRSNGT PTRQTKPNFE LSDMLVESDP SLWLDGCNGD NTRLRSINSL
0901: PELGPDATHD LALYQRSSLD QQWSRAGSIA TEDSDEGEFE TTCSSEQDSV RPASAPEASV TANGGASVAK KAQPKSVKST DIRGTNPAKR TSPLPKKANG
1001: TAHIPIKNGK QSTLGGVDGK KTPNGKVNTK K
0101: IQPGTVPKVV EVHSVSTIPS DGSALCAYQY FENVRNFLTG LQDLGLPTFE VSDLEKGGQG VRVVDCVLAL KSFAETKQLG KQSLFKHGGI VKPSMSAKCS
0201: VRKNEPFMKA MTRSHSAELL RDGVSLEQTL GLDCFLEPAE TITSDSIRML VQTILSDKKP EEVPLLVESL LSKVIHEFER RMANQNDLVK YTVDPNDSSS
0301: LSKTESSDTP QEMEATSTSD HGKMDEEDHE SVTNHVKTDE EDNSSVTNNE KMDDEDHNSV GSTGDVSAAV LVNGDSVAKD IQAKADIHFE LQKKQIQDMK
0401: SNLCTVKSGI EQFKLQYSED LAKLGNHLRT ISHAASGYHK VLEENRKLYN QIQDLRGNIR VYCRVRPFLP GKVSSSSSVA GIEDRTITLM TSSKQGKDAR
0501: KSFTFNRVFG PLATQAEIFV DMQPLVRSVL DGYNICIFAY GQTGSGKTFT MSGPKILTEE GLGVNYRALN DLFDIQAQRR DTFCYEISVQ MMEIYNEQVR
0601: DLLHSGPNKK LEIRNSSQNG IAVPDANRVP VASTSDVVDL MNLGQKNRAV CSTAMNDRSS RSHSCVTVHV QGQDLTSGTV LRGCMHLVDL AGSERVDKSE
0701: VVGDRLKEAQ HINKSLAALG DVIASLAQKS AHVPYRNSKL TQLLQDSLGG QAKTLMFVHI APEPDAIGES ISTLKFAERV ATVELGAAKT NKEGGEVKEL
0801: KEQIACLRAA LASKDGENES IRSTHSSPDI LRDIRISHAS PESGHPGEEA GCLEVRSNGT PTRQTKPNFE LSDMLVESDP SLWLDGCNGD NTRLRSINSL
0901: PELGPDATHD LALYQRSSLD QQWSRAGSIA TEDSDEGEFE TTCSSEQDSV RPASAPEASV TANGGASVAK KAQPKSVKST DIRGTNPAKR TSPLPKKANG
1001: TAHIPIKNGK QSTLGGVDGK KTPNGKVNTK K
001: MATEQQDSQL CLATILEDFL KQRNIQVSVG VDSSSLKKAD ETFGGRDLPV DPSDLRRYEA ARWVRNTLGV VGGRDLPADP SEEDFRIALR SGILLCNVLN
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIE
101: RVKPGAVPKV VEAPNDPLVN QDGAALSAFQ YFENLRNFLV FVEEMGIPTF EVSDFEKGGK SARIVECVLA LKSYREWKQS GGSGTWRYIL NSKPTTFGIA
201: KQYKRKDSEV PVDAVTNSPS STPSSEQPLL DQSDSNTKND GTASSIDAIV RAVFSDMKQE DIPVIVEDML KSVMVEYERR LATQNELLLM SAGNRDKLGS
301: GDLGRTISGN EETLSDASYG EENVTEIVNN NMEASQDSNV EELENQDYEL YAISKEKTEK QQLIIERQQT HTEELKHDLK AVKAGLSLLQ MKYQQEFTSL
401: GKHLHGLTYA ATGYQRVLEE NRKLYNQVQD LKGSIRVYCR VRPFLPGQKS VLTTVDHLED STLSIATPSK YGKEGQKTFT FNKVFGPSAS QEAVFADTQP
501: LIRSVLDGYN VCIFAYGQTG SGKTFTMMGP NELTDETLGV NYRALSDLFH LSSVRKETFS YNISVQMLEI YNEQVRDLLA TNGQTSRLEI RNSTQDGINV
601: PEATLVPVST TSDVIHLMNI GQKNRAVSAT AMNDRSSRSH SCLTVHVQGK DLTSGVTLRG SMHLVDLAGS ERIDKSEVTG DRLKEAQHIN KSLSALGDVI
701: ASLSQKNNHI PYRNSKLTQL LQDALGGQAK TLMFIHISPE LEDLGETLST LKFAERVATV DLGAARVNKD TSEVKELKEQ IASLKLALAR KESGADQTQL
801: QRPLTPDKLL RKKSLGVSSS FSKSANSTRQ VQTKHKPSQI DDVNSIE
Arabidopsis Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G09170]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.