Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G177300.1 | Wheat | cytosol | 97.92 | 97.85 |
| TraesCS6A01G188600.1 | Wheat | cytosol | 93.18 | 97.52 |
| HORVU0Hr1G015810.3 | Barley | cytosol | 91.38 | 92.51 |
| Os02t0229600-00 | Rice | plasma membrane | 35.49 | 88.37 |
| PGSC0003DMT400059487 | Potato | cytosol | 9.63 | 74.03 |
| Zm00001d016273_P001 | Maize | cytosol | 68.18 | 71.19 |
| KXG29848 | Sorghum | cytosol | 73.13 | 70.55 |
| GSMUA_Achr1P02560_001 | Banana | cytosol | 26.58 | 60.56 |
| TraesCS7B01G271700.2 | Wheat | cytosol | 50.29 | 57.52 |
| PGSC0003DMT400074040 | Potato | cytosol | 11.49 | 54.05 |
| TraesCS3B01G309000.1 | Wheat | cytosol | 33.69 | 48.25 |
| GSMUA_Achr4P25620_001 | Banana | cytosol | 37.86 | 47.91 |
| KRH39191 | Soybean | cytosol | 31.61 | 47.72 |
| VIT_17s0000g03700.t01 | Wine grape | cytosol | 34.05 | 46.98 |
| VIT_02s0025g03480.t01 | Wine grape | cytosol | 35.92 | 46.86 |
| CDY19209 | Canola | plastid | 31.18 | 46.52 |
| Solyc06g069130.2.1 | Tomato | cytosol, nucleus | 33.12 | 46.42 |
| PGSC0003DMT400031815 | Potato | cytosol | 28.66 | 46.07 |
| CDY46382 | Canola | cytosol | 29.09 | 44.21 |
| KRH59901 | Soybean | cytosol | 34.05 | 43.65 |
| KRH41185 | Soybean | cytosol | 33.84 | 43.53 |
| CDX68208 | Canola | cytosol, plastid | 31.32 | 43.08 |
| AT1G73860.1 | Thale cress | cytosol, plastid | 31.68 | 43.02 |
| CDY11085 | Canola | cytosol, plastid | 31.25 | 42.98 |
| CDY34366 | Canola | cytosol | 32.11 | 42.9 |
| KRH41631 | Soybean | cytosol | 32.47 | 42.88 |
| CDX73023 | Canola | cytosol, plastid | 27.51 | 42.79 |
| Bra003825.1-P | Field mustard | cytosol, plastid | 31.11 | 42.7 |
| CDY25511 | Canola | cytosol | 31.9 | 42.61 |
| CDY39749 | Canola | cytosol | 29.02 | 42.35 |
| Bra027652.1-P | Field mustard | cytosol | 32.18 | 42.11 |
| Bra025509.1-P | Field mustard | cytosol | 29.45 | 41.97 |
| CDY45358 | Canola | cytosol | 32.04 | 41.96 |
| AT1G63640.3 | Thale cress | cytosol | 32.26 | 41.88 |
| CDY62807 | Canola | cytosol | 31.97 | 41.71 |
| CDX96493 | Canola | cytosol, plastid | 28.09 | 41.51 |
| AT5G41310.1 | Thale cress | cytosol | 28.3 | 41.0 |
| GSMUA_Achr7P08590_001 | Banana | cytosol | 36.06 | 40.91 |
| Bra027797.1-P | Field mustard | cytosol | 31.82 | 40.75 |
| TraesCS1B01G354200.2 | Wheat | cytosol | 32.61 | 40.75 |
| KRH60336 | Soybean | cytosol | 36.14 | 40.6 |
| CDY26163 | Canola | plastid | 31.47 | 40.26 |
| Bra025908.1-P | Field mustard | cytosol, plastid | 30.17 | 39.0 |
| AT1G18410.4 | Thale cress | cytosol | 32.11 | 38.77 |
| Solyc12g036810.1.1 | Tomato | extracellular | 25.86 | 37.38 |
| Bra015957.1-P | Field mustard | cytosol, plastid | 22.34 | 37.2 |
| TraesCS4B01G186700.1 | Wheat | cytosol | 25.07 | 34.97 |
| TraesCS5B01G099000.1 | Wheat | cytosol | 24.35 | 33.83 |
| TraesCS4B01G126400.1 | Wheat | cytosol | 24.43 | 32.98 |
| TraesCS2B01G348700.1 | Wheat | cytosol | 23.13 | 31.05 |
| TraesCS3B01G196600.1 | Wheat | cytosol | 20.91 | 29.63 |
| TraesCS2B01G342100.1 | Wheat | cytosol | 15.09 | 27.2 |
| TraesCS2B01G505400.2 | Wheat | cytosol, plastid | 14.66 | 25.99 |
| TraesCS1B01G259800.1 | Wheat | cytosol | 14.8 | 23.84 |
| TraesCS5B01G032700.1 | Wheat | nucleus | 15.52 | 22.15 |
| TraesCS4B01G398000.1 | Wheat | cytosol | 16.52 | 19.59 |
| TraesCS2B01G514800.1 | Wheat | cytosol | 13.43 | 15.3 |
Protein Annotations
| Gene3D:1.10.418.10 | MapMan:20.1.3.12 | Gene3D:3.40.850.10 | InterPro:CH-domain | InterPro:CH_dom_sf | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001715 | InterPro:IPR001752 | InterPro:IPR036872 | InterPro:IPR036961 | InterPro:Kinesin-like_fam |
| InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 | PFAM:PF00307 | PRINTS:PR00380 |
| PFscan:PS50021 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF455 | SMART:SM00129 | SUPFAM:SSF47576 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS6B01G215900 | EnsemblPlants:TraesCS6B01G215900.1 | TIGR:cd01366 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:-:295773366..295781055
Molecular Weight (calculated)
155926.0 Da
IEP (calculated)
6.399
GRAVY (calculated)
-0.610
Length
1392 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLRAPNAAP DPATARRRAD AVGWLRVIFP DVPLPAPSDA SDNDLHAALS GGRLLCALLR KICPGALLDD ASTDNVGRFR AAVERMGVPT FSAFDLERGQ
0101: MTAVVTCILA LKDRFGSRIG EERNLTFLTR SDGEGSRKYM VAKLQRVLTS PIMSEPSSPS LGADLYSPSG VLQMKQGGFA DLPGCKISDL MKSSSLDNAP
0201: TQSLLGVVNS IVDESIDRKN GQIPYRIACL LRKVIVEIER RMSSQAGHIR NQNNLIKARE EKYQSRIRVL EALAGGQSGQ THMEKDKLKD KGQLPEEDMA
0301: MLMKCQEEVA RLMKEKEDMV RLLKEKEDMV RLLKEKEDMV RLLKEKDNMD LKKGKVEETQ QIVDEEKYRL LKEKDDTIVT LKKERQEMVR SLKEKEDMVS
0401: LLMAKEDMVD LKKVMVEERQ RIIDEGNDRL LKEKDDTIFR FTKEKEEMVR LLKEKEDIIR LMKENDDVVR SIQKEDMVNS ENGSIMDKKQ TTDDGNDILI
0501: SEKNTIVVRL TEEKEEMIRL LKEKEDTIQL MKEKEDIFMS TKEKEDNKAD LKKGTVGNMK QSTDEDIDTS TKEKGDIIRL MKENEDYNNT IMKLKLDLEA
0601: LKSLHEENCK LLESKKEDII KLLADKEDNA SMILQLKQDS LTKENEDILR LMKEKEDGNS IIAKVKLEME ALRSSYEEAC KLLESKEEDV VRLLADKEDN
0701: ASVILQLRQE LEATKRLHEI HSQQLETRAS QVKEELEHRI KEVELMLEDS IKRKREFEEV SKSRIQFWEQ KGIVVNQFVG LQVQNVQDLR LCSVSFRHEI
0801: LNCQKRWLEE LAGLGQNLKV VTNAAEKYHA ALAENRKLFN EIQELKGNIR VYCRIRPFQP GEDEGSNSVE YIGDNGELVL SNPTKQKEGG KNFTFNKVFG
0901: PTTTQDMVFK DIQPLIRSVL DGYNVCIFAY GQTGSGKTYT MMGPEKATEK EWGVNYRALN DLFNISHARR DMITYELTVQ MIEIYNEQIR DLLGGGGSQK
1001: KIGIQNTMQP NGIAVPDATI CPVNSTSHVI ELMQTGHGNR AMSATALNER SSRSHSVVTI HVRGQDLKTG NTSRGALHLV DLAGSERVDR SAVTGDRLKE
1101: AQHINKSLAA LGDVIFSLSQ KNAHVPYRNS KLTQVLQTSL GGHAKTLMFV QVNPDVSSYT ETLSTLKFAE RVSGVELGVA RTNKEGKEVK DVRELMDQLS
1201: MLKDTISKKD DEIEQLQLLN TSTSKLKSNR QADHILKHSS SSPGITSLGK VSSVGSGAAS DLDNFSDTSD RQSEAGSMLS IEPEVSGLGD VESDGRLSDA
1301: SDGGNSTGAE TDSSVSSVVD QGQEKASSAA KERLTKTVSR VQKLTVRKAS GLRPKPRDPA IPKPSVPTGA RRNTSTQGIP PARATSSAKR GP
0101: MTAVVTCILA LKDRFGSRIG EERNLTFLTR SDGEGSRKYM VAKLQRVLTS PIMSEPSSPS LGADLYSPSG VLQMKQGGFA DLPGCKISDL MKSSSLDNAP
0201: TQSLLGVVNS IVDESIDRKN GQIPYRIACL LRKVIVEIER RMSSQAGHIR NQNNLIKARE EKYQSRIRVL EALAGGQSGQ THMEKDKLKD KGQLPEEDMA
0301: MLMKCQEEVA RLMKEKEDMV RLLKEKEDMV RLLKEKEDMV RLLKEKDNMD LKKGKVEETQ QIVDEEKYRL LKEKDDTIVT LKKERQEMVR SLKEKEDMVS
0401: LLMAKEDMVD LKKVMVEERQ RIIDEGNDRL LKEKDDTIFR FTKEKEEMVR LLKEKEDIIR LMKENDDVVR SIQKEDMVNS ENGSIMDKKQ TTDDGNDILI
0501: SEKNTIVVRL TEEKEEMIRL LKEKEDTIQL MKEKEDIFMS TKEKEDNKAD LKKGTVGNMK QSTDEDIDTS TKEKGDIIRL MKENEDYNNT IMKLKLDLEA
0601: LKSLHEENCK LLESKKEDII KLLADKEDNA SMILQLKQDS LTKENEDILR LMKEKEDGNS IIAKVKLEME ALRSSYEEAC KLLESKEEDV VRLLADKEDN
0701: ASVILQLRQE LEATKRLHEI HSQQLETRAS QVKEELEHRI KEVELMLEDS IKRKREFEEV SKSRIQFWEQ KGIVVNQFVG LQVQNVQDLR LCSVSFRHEI
0801: LNCQKRWLEE LAGLGQNLKV VTNAAEKYHA ALAENRKLFN EIQELKGNIR VYCRIRPFQP GEDEGSNSVE YIGDNGELVL SNPTKQKEGG KNFTFNKVFG
0901: PTTTQDMVFK DIQPLIRSVL DGYNVCIFAY GQTGSGKTYT MMGPEKATEK EWGVNYRALN DLFNISHARR DMITYELTVQ MIEIYNEQIR DLLGGGGSQK
1001: KIGIQNTMQP NGIAVPDATI CPVNSTSHVI ELMQTGHGNR AMSATALNER SSRSHSVVTI HVRGQDLKTG NTSRGALHLV DLAGSERVDR SAVTGDRLKE
1101: AQHINKSLAA LGDVIFSLSQ KNAHVPYRNS KLTQVLQTSL GGHAKTLMFV QVNPDVSSYT ETLSTLKFAE RVSGVELGVA RTNKEGKEVK DVRELMDQLS
1201: MLKDTISKKD DEIEQLQLLN TSTSKLKSNR QADHILKHSS SSPGITSLGK VSSVGSGAAS DLDNFSDTSD RQSEAGSMLS IEPEVSGLGD VESDGRLSDA
1301: SDGGNSTGAE TDSSVSSVVD QGQEKASSAA KERLTKTVSR VQKLTVRKAS GLRPKPRDPA IPKPSVPTGA RRNTSTQGIP PARATSSAKR GP
0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R
Arabidopsis Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G63640]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.