CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34366	Canola	cytosol	96.83	96.83
CDY45358	Canola	cytosol	88.58	86.83
CDY62807	Canola	cytosol	88.48	86.41
AT1G63640.3	Thale cress	cytosol	88.48	86.01
CDY46382	Canola	cytosol	65.36	74.34
CDY39749	Canola	cytosol	64.59	70.55
GSMUA_Achr1P02560_001	Banana	cytosol	37.33	63.67
VIT_02s0025g03480.t01	Wine grape	cytosol	58.73	57.36
Os02t0229600-00	Rice	plasma membrane	30.61	57.07
PGSC0003DMT400031815	Potato	cytosol	45.78	55.08
KRH41185	Soybean	cytosol	56.14	54.07
KRH59901	Soybean	cytosol	55.95	53.68
Os01t0744000-01	Rice	cytosol	45.2	48.51
Os06t0554700-01	Rice	cytosol	21.69	48.39
GSMUA_AchrUn_...	Banana	cytosol	48.27	48.32
OQU87522	Sorghum	cytosol	43.95	48.06
Zm00001d012763_P002	Maize	cytosol	40.12	47.94
HORVU3Hr1G070900.4	Barley	cytosol	44.82	47.9
TraesCS3A01G275300.1	Wheat	cytosol	44.53	47.74
TraesCS3D01G275200.1	Wheat	cytosol	44.34	47.53
TraesCS3B01G309000.1	Wheat	cytosol	44.34	47.53
OQU78322	Sorghum	cytosol	43.67	47.25
Os05t0521300-04	Rice	cytosol	45.78	47.13
Zm00001d043504_P030	Maize	cytosol	43.86	46.73
GSMUA_Achr4P25620_001	Banana	cytosol	49.23	46.64
CDY19209	Canola	plastid	41.75	46.62
CDX68208	Canola	cytosol, plastid	41.75	42.98
CDY11085	Canola	cytosol, plastid	41.36	42.59
GSMUA_Achr7P08590_001	Banana	cytosol	49.9	42.38
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	41.94	42.3
CDX73023	Canola	cytosol, plastid	36.28	42.23
TraesCS1D01G343800.1	Wheat	cytosol	45.11	42.19
TraesCS1B01G354200.2	Wheat	cytosol	45.01	42.1
TraesCS1A01G341500.1	Wheat	cytosol	45.01	42.1
Zm00001d038797_P001	Maize	cytosol	33.4	41.38
CDX96493	Canola	cytosol, plastid	37.24	41.19
CDY26163	Canola	plastid	42.42	40.62
HORVU7Hr1G088620.8	Barley	cytosol	44.43	40.16
TraesCS7D01G366700.2	Wheat	cytosol	46.07	39.44
TraesCS7A01G356000.1	Wheat	cytosol	46.16	39.39
TraesCS7B01G271700.2	Wheat	cytosol	45.97	39.36
KXG20162	Sorghum	cytosol	44.72	38.54
CDY67329	Canola	cytosol	28.41	36.1
CDY53341	Canola	cytosol	31.38	35.54
CDY19745	Canola	cytosol	31.67	35.18
CDY57719	Canola	cytosol	32.05	33.94
CDX80606	Canola	cytosol	32.34	33.94
CDY31108	Canola	cytosol	31.57	33.74
CDX80111	Canola	cytosol	32.05	33.74
CDX88251	Canola	cytosol	30.61	33.61
CDY32155	Canola	cytosol	32.05	33.6
HORVU1Hr1G075920.5	Barley	cytosol	37.91	33.45
TraesCS6A01G188600.1	Wheat	cytosol	41.75	32.71
Zm00001d016273_P001	Maize	cytosol	41.75	32.63
CDY08613	Canola	cytosol	25.91	32.45
HORVU0Hr1G015810.3	Barley	cytosol	42.42	32.15
Zm00001d036987_P001	Maize	cytosol, plastid	32.15	31.9
TraesCS6B01G215900.1	Wheat	cytosol	42.61	31.9
TraesCS6D01G177300.1	Wheat	cytosol	42.51	31.8
CDY29715	Canola	cytosol	32.44	31.65
KXG29848	Sorghum	cytosol	43.57	31.46
CDY20350	Canola	cytosol	32.53	31.19
CDY00920	Canola	cytosol	27.26	30.28
CDY05571	Canola	cytosol	20.25	27.3
CDY25031	Canola	cytosol	20.35	27.18
CDY29282	Canola	cytosol	18.33	27.02
CDX89269	Canola	cytosol	18.23	26.87
CDY06633	Canola	cytosol	19.19	26.53
CDY68543	Canola	cytosol, plastid	19.1	26.43
CDY28759	Canola	cytosol, plastid	19.1	26.39
CDX99979	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.06	26.39
CDY67586	Canola	cytosol, plastid	19.0	26.29
CDY46372	Canola	cytosol, plastid	19.96	26.2
CDY39158	Canola	cytosol, plastid	19.87	26.1
CDY19726	Canola	cytosol	20.06	26.09
CDX72881	Canola	cytosol	22.74	21.94
CDX96387	Canola	cytosol	22.94	21.77
CDX82160	Canola	cytosol	23.13	21.25
CDY03649	Canola	cytosol	23.22	20.99
CDX76903	Canola	cytosol	19.87	19.68
CDY13741	Canola	cytosol	19.77	19.64
CDY55105	Canola	cytosol	18.04	14.94
CDX81427	Canola	cytosol	18.04	14.86
CDY18577	Canola	cytosol	17.95	14.78
CDY57771	Canola	cytosol, plastid	18.04	13.66

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:A0A078GJJ6	UniProt:A0A078GJJ6	EnsemblPlants:CDY25511
ProteinID:CDY25511	ProteinID:CDY25511.1	InterPro:CH-domain	InterPro:CH_dom_sf	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00032751001	InterPro:IPR001715	InterPro:IPR001752	InterPro:IPR036872	InterPro:IPR036961	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50021	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF741
SMART:SM00033	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540	UniParc:UPI0004EE3BD6	SEG:seg

Description

BnaC09g11360DBnaC09g11360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJJ6]

Coordinates

chrLK032176:-:167461..174120

Molecular Weight (calculated)

116145.0 Da

IEP (calculated)

6.870

GRAVY (calculated)

-0.595

Length

1042 amino acids

Sequence
(BLAST)

0001: MNINLEQDAN MSGVYAPSDA TSFLSFDGSE TRSSLDDTKK GHQNLVEWLN QTLPYLNLPS EASEDEVRAC LRDGTVLCNL LNQLSPGSMR MGGSFEPAYV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV FQSLKALKAS FSDGGNDKNS LCARRRWSLP EDHSDPRGDD RNFTDGFQSK EGFEIDISDA KISDLLKSNS
0201: LRNAPTRTLF DMLDKLLDES VKKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREDKYRS RIKVLETLAA GATQENEIVT NCMERTKLEK
0301: NRIEERERSE EKDVVRLKKE KELSDAEIRK LKQELKVVKE THANQCLELE AQAQNSKVEL ESKLKDAELQ VAESTRKVKE LEKLYLSKSQ KWEKKECTYQ
0401: SFIDNQFGAL QALNATSASI KQEVLRTQKK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TSIEYIGENG
0501: ELVVANPFKQ GKDTHRLFKF NKVFGQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFNL TQIRQNTVVY
0601: EVGVQMVEIY NEQVRDILSD GGVWNTALPN GLAVPDASMH SVRSTEDVLE LMNIGLMNRT VGATALNERS SRSHCVLSVH VRGVDVETDS VLRGSLHLVD
0701: LAGSERVDRS EVTGDRLKEA QHINKSLSAL GDVIFALAHK NPHVPYRNSK LTQVLQSSLG GQAKTLMFVQ VNPDGDSYAE TVSTLKFAER VSGVELGAAK
0801: SNKEGRDVRH LMEQVSSLKD VIAKKDEELQ NVQKLKGNNA TVPKRGLSNL RLLGPSSPRR HSIGPSPNGR RGKPSGLFGR STSDVDNCSE YSSKHSDSGS
0901: PQIDLEDDIE LIGLGDADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETEKPLEIT ERPEAPQLAP EKPEKSAKMV KNVTKDKISI PSKIPKQTLK
1001: PPGQTRPSRL SIATSSSSKA LTSAKRPTIS TSTSMKPLNR RR

Best Arabidopsis Sequence Match ( AT1G63640.4 )
(BLAST)

0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R

Arabidopsis Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G63640]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.