CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025908.1-P	Field mustard	cytosol, plastid	95.5	96.47
CDY19209	Canola	plastid	80.61	94.0
PGSC0003DMT400059487	Potato	cytosol	12.68	76.24
AT1G18410.4	Thale cress	cytosol	76.65	72.33
CDY11085	Canola	cytosol, plastid	63.6	68.38
CDX68208	Canola	cytosol, plastid	63.6	68.38
CDX73023	Canola	cytosol, plastid	55.88	67.93
CDX96493	Canola	cytosol, plastid	58.09	67.09
PGSC0003DMT400074040	Potato	cytosol	15.53	57.09
GSMUA_Achr1P02560_001	Banana	cytosol	31.62	56.3
Os02t0229600-00	Rice	plasma membrane	28.4	55.28
VIT_17s0000g03700.t01	Wine grape	cytosol	45.22	48.76
Solyc06g069130.2.1	Tomato	cytosol, nucleus	44.49	48.74
KRH39191	Soybean	cytosol	40.62	47.94
HORVU3Hr1G070900.4	Barley	cytosol	41.82	46.67
Os01t0744000-01	Rice	cytosol	41.54	46.55
TraesCS3A01G275300.1	Wheat	cytosol	41.54	46.5
TraesCS3D01G275200.1	Wheat	cytosol	41.45	46.4
OQU78322	Sorghum	cytosol	40.9	46.21
TraesCS3B01G309000.1	Wheat	cytosol	41.18	46.09
OQU87522	Sorghum	cytosol	39.98	45.65
Zm00001d012763_P002	Maize	cytosol	36.49	45.53
Os05t0521300-04	Rice	cytosol	42.0	45.16
Zm00001d043504_P030	Maize	cytosol	40.26	44.79
GSMUA_AchrUn_...	Banana	cytosol	42.74	44.67
KRH41631	Soybean	cytosol	42.56	43.93
CDY46382	Canola	cytosol	36.86	43.78
GSMUA_Achr4P25620_001	Banana	cytosol	44.12	43.64
CDY34366	Canola	cytosol	40.81	42.61
CDY25511	Canola	cytosol	40.62	42.42
Os06t0554700-01	Rice	cytosol	18.01	41.97
CDY39749	Canola	cytosol	36.49	41.61
CDY45358	Canola	cytosol	40.07	41.02
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	38.88	40.95
CDY62807	Canola	cytosol	39.89	40.67
TraesCS1B01G354200.2	Wheat	cytosol	40.99	40.04
TraesCS1D01G343800.1	Wheat	cytosol	40.81	39.86
TraesCS1A01G341500.1	Wheat	cytosol	40.72	39.77
Zm00001d038797_P001	Maize	cytosol	30.33	39.24
KRH60336	Soybean	cytosol	44.39	38.98
HORVU7Hr1G088620.8	Barley	cytosol	41.08	38.77
GSMUA_Achr7P08590_001	Banana	cytosol	42.83	37.98
TraesCS7A01G356000.1	Wheat	cytosol	41.54	37.02
TraesCS7B01G271700.2	Wheat	cytosol	41.27	36.89
TraesCS7D01G366700.2	Wheat	cytosol	41.18	36.81
KXG20162	Sorghum	cytosol	40.44	36.39
Solyc12g036810.1.1	Tomato	extracellular	30.51	34.48
HORVU1Hr1G075920.5	Barley	cytosol	36.95	34.04
CDY67329	Canola	cytosol	25.64	34.02
CDY53341	Canola	cytosol	27.76	32.83
CDY19745	Canola	cytosol	28.03	32.52
Zm00001d016273_P001	Maize	cytosol	39.8	32.48
TraesCS6A01G188600.1	Wheat	cytosol	38.97	31.88
TraesCS6B01G215900.1	Wheat	cytosol	40.26	31.47
HORVU0Hr1G015810.3	Barley	cytosol	39.52	31.27
TraesCS6D01G177300.1	Wheat	cytosol	39.8	31.08
CDX80606	Canola	cytosol	28.03	30.71
CDY32155	Canola	cytosol	28.03	30.68
CDY31108	Canola	cytosol	27.48	30.67
KXG29848	Sorghum	cytosol	40.44	30.49
CDY57719	Canola	cytosol	27.39	30.28
CDX80111	Canola	cytosol	27.48	30.2
CDX88251	Canola	cytosol	26.1	29.93
Zm00001d036987_P001	Maize	cytosol, plastid	28.31	29.33
CDY08613	Canola	cytosol	21.51	28.12
CDY05571	Canola	cytosol	19.3	27.17
CDY29282	Canola	cytosol	17.65	27.16
CDY25031	Canola	cytosol	19.39	27.05
CDX89269	Canola	cytosol	17.56	27.02
CDX99979	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.39	26.64
CDY00920	Canola	cytosol	22.89	26.55
CDY29715	Canola	cytosol	25.92	26.4
CDY28759	Canola	cytosol, plastid	18.29	26.39
CDY06633	Canola	cytosol	18.29	26.39
CDY20350	Canola	cytosol	26.29	26.31
CDY68543	Canola	cytosol, plastid	18.2	26.29
CDY19726	Canola	cytosol	19.3	26.22
CDY67586	Canola	cytosol, plastid	18.11	26.16
CDY39158	Canola	cytosol, plastid	18.47	25.35
CDY46372	Canola	cytosol, plastid	18.47	25.31
CDX76903	Canola	cytosol	19.58	20.25
CDY13741	Canola	cytosol	19.39	20.11
CDX72881	Canola	cytosol	19.94	20.09
CDX96387	Canola	cytosol	19.85	19.67
CDX82160	Canola	cytosol	20.04	19.22
CDY03649	Canola	cytosol	19.94	18.82
CDY55105	Canola	cytosol	16.45	14.23
CDX81427	Canola	cytosol	16.27	13.99
CDY18577	Canola	cytosol	16.18	13.91
CDY57771	Canola	cytosol, plastid	16.73	13.23

Protein Annotations

MapMan:20.1.3.12	Gene3D:3.40.850.10	GO:A0A078GNG4	UniProt:A0A078GNG4	EnsemblPlants:CDY26163	ProteinID:CDY26163
ProteinID:CDY26163.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00034817001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF570	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EEA354
SEG:seg	:	:	:	:	:

Description

BnaA06g12540DBnaA06g12540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNG4]

Coordinates

chrLK032186:+:38844..44367

Molecular Weight (calculated)

122039.0 Da

IEP (calculated)

9.194

GRAVY (calculated)

-0.714

Length

1088 amino acids

Sequence
(BLAST)

0001: MPFFSCCTKA SLCYSPGSSR GDSTPRSPFS PSSPYERRKA YAADSKFQRP QATSSSSPLD PSSPASMLHG GHKFHEAFQM KQGRFDLQAA KISEMMKSNN
0101: LDNAPTQSLL SIATGILDDS IERNNGEVPQ RVACLLRKVV LEIERRISTQ SEHLRTQNSV FKAREEKYQS RIKVLETLAS GTSEENEIAT KQLRRIKTEK
0201: SKLEEKKKTK EEDMVRLEKA NGEYNHEIST LRRELETAKK AYEQQCLQME SHTKLEEKKK NKEEDIDIVR LEKVNGEYNL EISTLRRELE TTKKAYEQQC
0301: LRMESQTQVA TTGIEDRVKE LEQMTKDASV SKIALEERIK ELEKIGKEAN AAKTALEEKV KELQQFKLEI VTVNTSLEAK NQDLEKMGKE AYAAKTTLEE
0401: TVKELQQFKK ETVAVNTSLE AKNRELEKMG KEAISAKTIL EEKNRELEHN LAQWKSKAKE MEENLDLKSR SWSQKELSYR RFINFQFQAL QELRLYSKSI
0501: KQEILKVQDS YKGEFSQLGK KLLELGEAAE NYHAVLAENQ KLFNELQELK GNIRVYCRVR PFLPGQGASN TVVEHIGEHG ELVVLNPTKP GKDGLRKFRF
0601: NKVYSPASTQ AEVFSDIKPL VRSVLDGYNV CIFAYGQTGS GKTYTMTGPD GASEEEWGVN YRALNDLFKI SQSRKSNIAY EVGVQMVEIY NEQVRDLLSG
0701: ILSTTQQNGL AVPDASMYPV TSTSDVLELM NIGLNNRVVS STALNERSSR SHSIVTVHVR GKDLKTGSAL YGNLHLVDLA GSERVDRSEV TGDRLKEAQH
0801: INKSLSALGD VIFSLASKSS HVPYRNSKLT QLLQSSLGGR AKTLMFVQLN PDVISYSESM STLKFAERVS GVELGAAKSS KDGRDVRDLM EQLGSLKDTI
0901: ARKDDEIERL HLLKDINYPQ RLQRKSLGNS DEFYSEESQL SIEEDSRSQQ DHLRQSRHSI TDGEALASSI GSEYEERLDD ETEGSIDVPR AAEGRKPLKM
1001: SDKTSKPVTP RASTKTTRPL DKLKVATRAV KAASGLMSPS KPTSGLMSPS KPTSGLMSPS KPTSSLMSPS IKKTGSASNL VKSPKRWS

Best Arabidopsis Sequence Match ( AT1G18410.3 )
(BLAST)

0001: MMNSLTDQSG SSHGGSTPRS PFSPSSPRER HNKGLADSRF QRPLPNSSAL DPSSPGSMLH GGHKSHEAFQ MKQGRFDLQA AKISELMKSN NLDNAPTQSL
0101: LSIVNGILDE TIERKNGELP QRVACLLRKV VQEIERRIST QSEHLRTQNS VFKAREEKYQ SRIKVLETLA SGTSEENEIA TRQLRRIKTE KSKLEEKKKD
0201: KEEDMVGIEK ENGHYNLEIS TLRRELETTK KAYEQQCLQM ESKTKGATAG IEDRVKELEQ MRKDASVARK ALEERVRELE KMGKEADAVK MNLEEKVKEL
0301: QKYKDETITV TTSIEGKNRE LEQFKQETMT VTTSLEAQNR ELEQAIKETM TVNTSLEAKN RELEQSKKET MTVNTSLKAK NRELEQNLVH WKSKAKEMEE
0401: KSELKNRSWS QKELSYRSFI SFQCQALQEL RFYSKSIKQE ILKVQDKYTV EFSQLGRKLL ELGDAAANYH EVLTENQKLF NELQELKGNI RVYCRVRPFL
0501: RGQGASKTVV EHIGDHGELV VLNPTKPGKD AHRKFRFNKV YSPASTQAEV FSDIKPLIRS VLDGYNVCIF AYGQTGSGKT YTMTGPDGAS EEEWGVNYRA
0601: LNDLFRISQS RKSNIAYEVG VQMVEIYNEQ VRDLLSGDSS QKKLGILSTT QQNGLAVPDA SMYPVTSTSD VLELMSIGLQ NRVVSSTALN ERSSRSHSIV
0701: TVHVRGKDLK TGSALYGNLH LVDLAGSERV DRSEVTGDRL KEAQHINKSL SALGDVIFSL ASKSSHVPYR NSKLTQLLQS SLGGRAKTLM FVQLNPDITS
0801: YSESMSTLKF AERVSGVELG AAKSSKDGRD VRELMEQLGS LKDTIARKDD EIERLHLLKD INYPQRLQKK SLGQSDDFNS EAGDSQLSIE DDSRFQHDYT
0901: RQSRHSVTDG EALASSTDAE YDDETEGSTD APCAAEGRKP LKISDKPKPV TPRSNTTTSR PLDKLKQVTM RTTNIAKATS ALLSPSSQGM KKTGSASNFL
1001: KSPKDSKRWS

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT1G18410]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.