Factsheet for AT1G18410.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19209	Canola	plastid	64.7	79.96
CDY26163	Canola	plastid	72.33	76.65
PGSC0003DMT400059487	Potato	cytosol	11.8	75.14
Bra025908.1-P	Field mustard	cytosol, plastid	69.82	74.74
AT1G73860.1	Thale cress	cytosol, plastid	59.06	66.44
GSMUA_Achr1P02560_001	Banana	cytosol	29.75	56.14
PGSC0003DMT400074040	Potato	cytosol	14.31	55.74
Os02t0229600-00	Rice	plasma membrane	26.97	55.64
KRH39191	Soybean	cytosol	39.55	49.46
Solyc06g069130.2.1	Tomato	cytosol, nucleus	42.32	49.14
VIT_17s0000g03700.t01	Wine grape	cytosol	41.72	47.67
HORVU3Hr1G070900.4	Barley	cytosol	40.16	47.49
Os01t0744000-01	Rice	cytosol	39.98	47.48
TraesCS3A01G275300.1	Wheat	cytosol	39.98	47.43
TraesCS3D01G275200.1	Wheat	cytosol	39.98	47.43
TraesCS3B01G309000.1	Wheat	cytosol	39.72	47.12
OQU87522	Sorghum	cytosol	38.42	46.48
Os05t0521300-04	Rice	cytosol	40.76	46.44
OQU78322	Sorghum	cytosol	38.59	46.21
Zm00001d043504_P030	Maize	cytosol	39.03	46.01
Zm00001d012763_P002	Maize	cytosol	34.78	45.99
GSMUA_AchrUn_...	Banana	cytosol	41.37	45.82
GSMUA_Achr4P25620_001	Banana	cytosol	42.84	44.91
KRH41631	Soybean	cytosol	40.5	44.31
Os06t0554700-01	Rice	cytosol	17.26	42.61
AT1G63640.3	Thale cress	cytosol	39.29	42.26
AT5G41310.1	Thale cress	cytosol	35.13	42.14
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	36.86	41.14
TraesCS1B01G354200.2	Wheat	cytosol	39.64	41.02
TraesCS1D01G343800.1	Wheat	cytosol	39.38	40.75
TraesCS1A01G341500.1	Wheat	cytosol	39.38	40.75
KRH60336	Soybean	cytosol	42.93	39.95
Zm00001d038797_P001	Maize	cytosol	28.88	39.6
GSMUA_Achr7P08590_001	Banana	cytosol	42.06	39.53
HORVU7Hr1G088620.8	Barley	cytosol	38.51	38.51
KXG20162	Sorghum	cytosol	38.51	36.72
TraesCS7B01G271700.2	Wheat	cytosol	38.68	36.65
TraesCS7A01G356000.1	Wheat	cytosol	38.77	36.61
TraesCS7D01G366700.2	Wheat	cytosol	38.59	36.57
Solyc12g036810.1.1	Tomato	extracellular	29.84	35.72
HORVU1Hr1G075920.5	Barley	cytosol	34.78	33.95
TraesCS6A01G188600.1	Wheat	cytosol	37.73	32.71
Zm00001d016273_P001	Maize	cytosol	37.64	32.56
TraesCS6B01G215900.1	Wheat	cytosol	38.77	32.11
AT5G27000.1	Thale cress	cytosol	27.41	32.02
HORVU0Hr1G015810.3	Barley	cytosol	37.81	31.71
TraesCS6D01G177300.1	Wheat	cytosol	38.25	31.66
AT2G47500.1	Thale cress	cytosol	26.63	31.23
KXG29848	Sorghum	cytosol	38.94	31.12
Zm00001d036987_P001	Maize	cytosol, plastid	26.89	29.52
AT1G09170.5	Thale cress	cytosol	26.71	29.45
AT3G10310.2	Thale cress	cytosol	24.63	29.31
AT4G27180.1	Thale cress	cytosol	17.95	27.79
AT5G27550.1	Thale cress	cytosol	17.78	26.8
AT4G05190.1	Thale cress	cytosol, plastid	18.13	26.46
AT5G54670.1	Thale cress	cytosol, plastid	17.17	26.26
AT3G44730.2	Thale cress	cytosol	25.41	25.88
AT4G21270.1	Thale cress	cytosol	17.69	25.73
AT2G22610.3	Thale cress	cytosol	18.99	20.2
AT1G72250.3	Thale cress	cytosol	19.08	18.09
AT5G65930.3	Thale cress	cytosol	16.48	15.01

Protein Annotations

MapMan:20.1.3.12	Gene3D:3.40.850.10	EntrezGene:838422	UniProt:A0A1P8AVA1	ProteinID:ANM60611.1	ArrayExpress:AT1G18410
EnsemblPlantsGene:AT1G18410	RefSeq:AT1G18410	TAIR:AT1G18410	RefSeq:AT1G18410-TAIR-G	EnsemblPlants:AT1G18410.4	Unigene:At.51664
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	RefSeq:NP_001322886.1	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF570	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0008490A50	SEG:seg

Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT1G18410]

Coordinates

chr1:-:6336470..6342527

Molecular Weight (calculated)

129385.0 Da

IEP (calculated)

6.530

GRAVY (calculated)

-0.748

Length

1153 amino acids

Sequence
(BLAST)

0001: MLESEFQREH AFESATEQEL TCPISDNLHE SVEADDDSVQ MLDNLTLNTN PAESCESEEI QTKALPSSSS GQDLVASDED SEDVELGDTF YSCSELLQRN
0101: CCVLPYKAQK KTKENPFDFD VRTWSSPCDF PRFGEMILLS PVLNPMPFFS CCTKRAIFCS SPGSSHGGST PRSPFSPSSP RERHNKGLAD SRFQRPLPNS
0201: SALDPSSPGS MLHGGHKSHE AFQMKQGRFD LQAAKISELM KSNNLDNAPT QSLLSIVNGI LDETIERKNG ELPQRVACLL RKVVQEIERR ISTQSEHLRT
0301: QNSVFKAREE KYQSRIKVLE TLASGTSEEN ETEKSKLEEK KKDKEEDMVG IEKENGHYNL EISTLRRELE TTKKAYEQQC LQMESKTKGA TAGIEDRVKE
0401: LEQMRKDASV ARKALEERVR ELEKMGKEAD AVKMNLEEKV KELQKYKDET ITVTTSIEGK NRELEQFKQE TMTVTTSLEA QNRELEQAIK ETMTVNTSLE
0501: AKNRELEQSK KETMTVNTSL KAKNRELEQN LVHWKSKAKE MEEKSELKNR SWSQKELSYR SFISFQCQAL QELRFYSKSI KQEILKVQDK YTVEFSQLGR
0601: KLLELGDAAA NYHEVLTENQ KLFNELQELK GNIRVYCRVR PFLRGQGASK TVVEHIGDHG ELVVLNPTKP GKDAHRKFRF NKVYSPASTQ AEVFSDIKPL
0701: IRSVLDGYNV CIFAYGQTGS GKTYTMTGPD GASEEEWGVN YRALNDLFRI SQSRKSNIAY EVGVQMVEIY NEQVRDLLSG DSSQKKLGIL STTQQNGLAV
0801: PDASMYPVTS TSDVLELMSI GLQNRVVSST ALNERSSRSH SIVTVHVRGK DLKTGSALYG NLHLVDLAGS ERVDRSEVTG DRLKEAQHIN KSLSALGDVI
0901: FSLASKSSHV PYRNSKLTQL LQSSLGGRAK TLMFVQLNPD ITSYSESMST LKFAERVSGV ELGAAKSSKD GRDVRELMEQ LGSLKDTIAR KDDEIERLHL
1001: LKDINYPQRL QKKSLGQSDD FNSEAGDSQL SIEDDSRFQH DYTRQSRHSV TDGEALASST DAEYDDETEG STDAPCAAEG RKPLKISDKP KPVTPRSNTT
1101: TSRPLDKLKQ VTMRTTNIAK ATSALLSPSS QGMKKTGSAS NFLKSPKDSK RWS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.