Factsheet for AT5G41310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46382	Canola	cytosol	77.0	80.79
CDY39749	Canola	cytosol	76.07	76.62
Bra025509.1-P	Field mustard	cytosol	77.42	76.15
AT1G63640.3	Thale cress	cytosol	74.4	66.7
GSMUA_Achr1P02560_001	Banana	cytosol	36.0	56.63
Os02t0229600-00	Rice	plasma membrane	30.39	52.24
VIT_02s0025g03480.t01	Wine grape	cytosol	57.54	51.83
KRH41185	Soybean	cytosol	53.59	47.6
KRH59901	Soybean	cytosol	53.69	47.51
PGSC0003DMT400031815	Potato	cytosol	42.14	46.77
Os06t0554700-01	Rice	cytosol	22.27	45.82
Os01t0744000-01	Rice	cytosol	43.08	42.64
OQU78322	Sorghum	cytosol	41.83	41.74
GSMUA_AchrUn_...	Banana	cytosol	44.95	41.5
TraesCS3B01G309000.1	Wheat	cytosol	41.94	41.46
Os05t0521300-04	Rice	cytosol	43.6	41.4
TraesCS3A01G275300.1	Wheat	cytosol	41.83	41.36
TraesCS3D01G275200.1	Wheat	cytosol	41.83	41.36
HORVU3Hr1G070900.4	Barley	cytosol	41.94	41.33
OQU87522	Sorghum	cytosol	40.89	41.24
GSMUA_Achr4P25620_001	Banana	cytosol	46.62	40.73
Zm00001d043504_P030	Maize	cytosol	41.42	40.7
Zm00001d012763_P002	Maize	cytosol	36.52	40.25
AT1G73860.1	Thale cress	cytosol, plastid	41.73	39.12
GSMUA_Achr7P08590_001	Banana	cytosol	49.22	38.55
Zm00001d010790_P017	Maize	cytosol, endoplasmic reticulum, nucleus	40.69	37.85
TraesCS1D01G343800.1	Wheat	cytosol	42.66	36.8
TraesCS1A01G341500.1	Wheat	cytosol	42.66	36.8
TraesCS1B01G354200.2	Wheat	cytosol	42.35	36.53
Zm00001d038797_P001	Maize	cytosol	31.74	36.27
HORVU7Hr1G088620.8	Barley	cytosol	43.39	36.17
TraesCS7D01G366700.2	Wheat	cytosol	45.58	35.99
TraesCS7B01G271700.2	Wheat	cytosol	45.58	35.99
TraesCS7A01G356000.1	Wheat	cytosol	45.58	35.87
AT1G18410.4	Thale cress	cytosol	42.14	35.13
KXG20162	Sorghum	cytosol	44.12	35.07
AT5G27000.1	Thale cress	cytosol	33.92	33.03
AT2G47500.1	Thale cress	cytosol	32.47	31.74
HORVU1Hr1G075920.5	Barley	cytosol	36.84	29.97
AT3G10310.2	Thale cress	cytosol	30.07	29.82
AT1G09170.5	Thale cress	cytosol	32.36	29.73
TraesCS6A01G188600.1	Wheat	cytosol	40.27	29.1
AT3G44730.2	Thale cress	cytosol	33.92	28.8
AT5G27550.1	Thale cress	cytosol	22.89	28.76
HORVU0Hr1G015810.3	Barley	cytosol	41.1	28.73
Zm00001d036987_P001	Maize	cytosol, plastid	31.32	28.67
Zm00001d016273_P001	Maize	cytosol	39.33	28.36
TraesCS6B01G215900.1	Wheat	cytosol	41.0	28.3
TraesCS6D01G177300.1	Wheat	cytosol	40.79	28.14
KXG29848	Sorghum	cytosol	42.04	28.0
AT4G05190.1	Thale cress	cytosol, plastid	20.92	25.44
AT4G27180.1	Thale cress	cytosol	19.67	25.37
AT5G54670.1	Thale cress	cytosol, plastid	19.88	25.33
AT4G21270.1	Thale cress	cytosol	20.6	24.97
AT2G22610.3	Thale cress	cytosol	22.68	20.11
AT1G72250.3	Thale cress	cytosol	23.83	18.83
AT5G65930.3	Thale cress	cytosol	19.35	14.69

Protein Annotations

Gene3D:1.10.418.10	MapMan:20.1.3.12	Gene3D:3.40.850.10	ArrayExpress:AT5G41310	EnsemblPlantsGene:AT5G41310	RefSeq:AT5G41310
TAIR:AT5G41310	RefSeq:AT5G41310-TAIR-G	EnsemblPlants:AT5G41310.1	TAIR:AT5G41310.1	Unigene:At.55294	InterPro:CH-domain
InterPro:CH_dom_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001715	InterPro:IPR001752
InterPro:IPR036872	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF00307	PO:PO:0001016	PO:PO:0001017	PO:PO:0007616
PO:PO:0009046	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50021
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF741	SMART:SM00129	SUPFAM:SSF47576	SUPFAM:SSF52540
UniParc:UPI00001627F2	SEG:seg	:	:	:	:

Description

P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT5G41310]

Coordinates

chr5:-:16516470..16522392

Molecular Weight (calculated)

108121.0 Da

IEP (calculated)

8.950

GRAVY (calculated)

-0.678

Length

961 amino acids

Sequence
(BLAST)

001: MKNRIKKGSS MIGVYGRSDG SSSIQSSNGS ESRESIDDNK QGHQSLVEWL NETLPYLNLP WEASEEELRA CLVDGTVLCN LLNQLSPGSM RMGGSFEPGC
101: VNIERFLAAM DEMTLPRFES LKALKASFSD DGYDKNTLSA RRRWSLPADH SKGVDSNFND GGSQFIEASE INTSHHSLQN TSTRSLFDML DRLLDESSQK
201: MNVSHVYVSI LRGIVQVVEQ RISNQAENLK NQNILFRVRE EKYRSRINVL ETLASGTTDE NEVRRKRCAP NRKGKERSNA ELSKLKQELE IVKETHEKQF
301: LELKLNAQKA KVELERQVKN SELRVVEAKE LEKLCETKTK RWEKKEQTYK RFINHQTEAL QELKATSMSL KHDVLKIGEN YFLDLTYYGI KLRGVAHAAK
401: NYQIIIEENR RLYNEVQELK GNIRVYCRIR PFLQGQNKKQ TSIEYTGENG ELVVANPLKQ GKDTYRLFKF NKVFGPESTQ EEVFLDTRPM IRSILDGYNV
501: CIFAYGQTGS GKTYTMSGPS ITSEEDRGVN YRALNDLFHL TQSRQNSVMY EVGVQMVEIY NEQVRDLLSQ DVPDASMHSV RSTEDVLELM NIGLMNRTVG
601: ATTLNEKSSR SHSVLSVHVR GVDVKTESVL RGSLHLVDLA GSERVGRSEV TGERLKEAQH INKSLSALGD VIFALAHKNP HVPYRNSKLT QVLQNSLGGQ
701: AKTLMFVQIN PDEDSYAETV STLKFAERVS GVELGAARSY KEGRDVRQLM EQVSNLKDMI AKKDEELQKF QNINGIQKRG LSKLRIVSPP RRHSLGGALT
801: NSPRRRQGPG LLGRTTSDIH RHQNESRSSS KFSGGAKDNN IFEDTELLGF EESNNEERLS DISDSCLSMG TETDGSISSG AMELTLFPET SNPPEMFEQS
901: EQNDKAHVGV GPSKPLKHTP KPDISKPSRL SISTTSSKAL TSSKRPVTGI SSSVKPLNRK R

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.