Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G177300.1 | Wheat | cytosol | 98.12 | 93.68 |
| TraesCS6B01G215900.1 | Wheat | cytosol | 97.52 | 93.18 |
| HORVU0Hr1G015810.3 | Barley | cytosol | 91.13 | 88.15 |
| Os02t0229600-00 | Rice | plasma membrane | 36.62 | 87.12 |
| PGSC0003DMT400059487 | Potato | cytosol | 10.0 | 73.48 |
| Zm00001d016273_P001 | Maize | cytosol | 68.65 | 68.49 |
| KXG29848 | Sorghum | cytosol | 73.16 | 67.43 |
| GSMUA_Achr1P02560_001 | Banana | cytosol | 27.59 | 60.07 |
| TraesCS7A01G356000.1 | Wheat | cytosol | 51.58 | 56.18 |
| PGSC0003DMT400074040 | Potato | cytosol | 11.43 | 51.35 |
| KRH39191 | Soybean | cytosol | 33.01 | 47.61 |
| GSMUA_Achr4P25620_001 | Banana | cytosol | 39.02 | 47.18 |
| TraesCS3A01G275300.1 | Wheat | cytosol | 34.06 | 46.6 |
| Solyc06g069130.2.1 | Tomato | cytosol, nucleus | 34.59 | 46.32 |
| VIT_17s0000g03700.t01 | Wine grape | cytosol | 35.11 | 46.28 |
| VIT_02s0025g03480.t01 | Wine grape | cytosol | 36.92 | 46.02 |
| PGSC0003DMT400031815 | Potato | cytosol | 29.55 | 45.38 |
| CDY19209 | Canola | plastid | 31.65 | 45.12 |
| KRH59901 | Soybean | cytosol | 35.26 | 43.19 |
| CDY46382 | Canola | cytosol | 29.7 | 43.12 |
| KRH41185 | Soybean | cytosol | 35.04 | 43.07 |
| KRH41631 | Soybean | cytosol | 33.46 | 42.22 |
| CDY34366 | Canola | cytosol | 32.93 | 42.03 |
| CDX68208 | Canola | cytosol, plastid | 31.88 | 41.9 |
| CDY11085 | Canola | cytosol, plastid | 31.8 | 41.8 |
| AT1G73860.1 | Thale cress | cytosol, plastid | 32.18 | 41.76 |
| CDY25511 | Canola | cytosol | 32.71 | 41.75 |
| Bra003825.1-P | Field mustard | cytosol, plastid | 31.73 | 41.62 |
| CDX73023 | Canola | cytosol, plastid | 27.89 | 41.45 |
| CDY39749 | Canola | cytosol | 29.7 | 41.4 |
| Bra027652.1-P | Field mustard | cytosol | 33.01 | 41.26 |
| CDY45358 | Canola | cytosol | 32.86 | 41.11 |
| Bra025509.1-P | Field mustard | cytosol | 30.15 | 41.04 |
| CDY62807 | Canola | cytosol | 32.78 | 40.86 |
| AT1G63640.3 | Thale cress | cytosol | 32.93 | 40.86 |
| CDX96493 | Canola | cytosol, plastid | 28.65 | 40.45 |
| AT5G41310.1 | Thale cress | cytosol | 29.1 | 40.27 |
| KRH60336 | Soybean | cytosol | 37.37 | 40.11 |
| Bra027797.1-P | Field mustard | cytosol | 32.78 | 40.11 |
| GSMUA_Achr7P08590_001 | Banana | cytosol | 36.92 | 40.02 |
| TraesCS1A01G341500.1 | Wheat | cytosol | 33.38 | 39.86 |
| CDY26163 | Canola | plastid | 31.88 | 38.97 |
| AT1G18410.4 | Thale cress | cytosol | 32.71 | 37.73 |
| Bra025908.1-P | Field mustard | cytosol, plastid | 30.53 | 37.7 |
| Solyc12g036810.1.1 | Tomato | extracellular | 27.07 | 37.38 |
| Bra015957.1-P | Field mustard | cytosol, plastid | 22.78 | 36.24 |
| TraesCS4A01G117700.1 | Wheat | cytosol | 25.64 | 34.13 |
| TraesCS5A01G092900.1 | Wheat | cytosol | 25.19 | 33.37 |
| TraesCS4A01G169700.2 | Wheat | cytosol | 25.64 | 33.11 |
| TraesCS2A01G333200.1 | Wheat | cytosol | 23.76 | 30.5 |
| TraesCS3A01G169800.2 | Wheat | cytosol | 21.2 | 28.75 |
| TraesCS2A01G344500.1 | Wheat | cytosol | 15.26 | 27.1 |
| TraesCS2A01G480500.1 | Wheat | cytosol, plastid | 15.26 | 25.86 |
| TraesCS1A01G249100.1 | Wheat | cytosol | 15.04 | 23.45 |
| TraesCS5A01G489000.1 | Wheat | cytosol | 15.79 | 23.18 |
| TraesCS5A01G032500.1 | Wheat | nucleus | 15.79 | 21.65 |
| TraesCS5A01G556500.2 | Wheat | cytosol, mitochondrion | 16.84 | 19.19 |
| TraesCS2A01G487500.1 | Wheat | cytosol | 13.91 | 14.59 |
Protein Annotations
| Gene3D:1.10.418.10 | MapMan:20.1.3.12 | Gene3D:3.40.850.10 | InterPro:CH-domain | InterPro:CH_dom_sf | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001715 | InterPro:IPR001752 | InterPro:IPR036872 | InterPro:IPR036961 | InterPro:Kinesin-like_fam |
| InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 | PFAM:PF00307 | PRINTS:PR00380 |
| PFscan:PS50021 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF455 | SMART:SM00129 | SUPFAM:SSF47576 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS6A01G188600 | EnsemblPlants:TraesCS6A01G188600.1 | TIGR:cd01366 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:+:230697176..230704091
Molecular Weight (calculated)
149172.0 Da
IEP (calculated)
5.480
GRAVY (calculated)
-0.600
Length
1330 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLRAPNAAP DPATARRRAD AVGWLRVIFP DVPLPPPSDA SDNELHAALS GGRLLCALLR KICPGALLDD VSTDNVGRFR AAVERMGVPT FSAFDLERGQ
0101: MTAVVTCILA LKDRFGSRIG EERNVTFLTR SDSEGSRKYM VAKLQRVLTS PIMSEPSTPS LGADLYSPSG VLQMKQGGFA DLPGCKISDL MKSSSLDNAP
0201: TQSLLGVVNS IVDESIDRKN GQIPYRIACL LRKVIVEIER RMSSQAGHIR NQNNLIKARE EKYQSRIRVL EALAGGQSGQ THMEKDKLKD KGQLPEEDMA
0301: MLMKCQEEVA RLMKEKEDMV TLLKEKEDMV RLLKEKEDMV RLLKEKDDIV DLKKGKVEET QQIVDEEKYR LLKEKDDTIV TLKKEKQEMV RSLKEKEDMV
0401: SLLMAKEDMV DLKKVMVEER QRIIDEGNDR LLKEKDDTIF RFTKEKEEMV RLLKEKEDII RLMKENDDVV RSIQKEDMVN SENGSIKDKK QTTDDGNDRL
0501: ISEKNTIVVR LTEEKEEMIR LLKEKEDTIR LMKEKEDNKA DLKKGTVRNI KQSTDEDTDT STKEKSDIIR LMKENEDYNN TIMKLKLDLE ALKSLHEENC
0601: ELLESKKEDI IKLLADKEDN ASMILQLKQD SLTKENEDIL RLMKEKEDGN SIIAKVKLEM EALRSSYEEA CKLLESKEGD VVRLLADKED NASVILQLRQ
0701: ELEATKRLHE THSQQLETRA SQVKEELEHR IKEVELMLED SIKRKRELEE VSKSRIQFWE QKGIVVNQFV GLQVQNVQDL RLCSVSVRHE ILNCQKRWLE
0801: ELAGLGENLK AVTNAAEKYH AALEENRKLF NEIQELKGNI RVYCRIRPFQ PGEDEGSNSV EYIGDNGELV LTNPTKQKEG GKNFTFNKVF GPTTTQDMVF
0901: KDIQPLIRSV LDGYNVCIFA YGQTGSGKTY TMMGPEKATE KEWGVNYRAL NDLFNISHAR RDMITYELTV QMIEIYNEQI RDLLGGGGAQ KKIGIQNTMQ
1001: PNGIAVPDAT ICPVNSTSQV IDLMQTGHGN RAMSATALNE RSSRSHSVVT IHVRGQDLKT GNTSRGALHL VDLAGSERVD CSAVTGDRLK EAQHINKSLA
1101: ALGDVIFSLS QKNAHVPYRN SKLTQVLQTS LGGHAKTLMF VQVNPDVSSY TETLSTLKFA ERVSGVELGV ARTNKEGKEV KDVRELMDQL SMLKDTISKK
1201: DDEIEQLQLL NTSTSKLKSN RQADHILKHS SSSPGITSLG KVSSVGGGAA SDLDNFSDTS DRQSEAGSML SIEPEVSGLG DVESDGRLSD ASDGGNSTGA
1301: ETDSSVSSVV DQGQEKASST AKERLTKTVS
0101: MTAVVTCILA LKDRFGSRIG EERNVTFLTR SDSEGSRKYM VAKLQRVLTS PIMSEPSTPS LGADLYSPSG VLQMKQGGFA DLPGCKISDL MKSSSLDNAP
0201: TQSLLGVVNS IVDESIDRKN GQIPYRIACL LRKVIVEIER RMSSQAGHIR NQNNLIKARE EKYQSRIRVL EALAGGQSGQ THMEKDKLKD KGQLPEEDMA
0301: MLMKCQEEVA RLMKEKEDMV TLLKEKEDMV RLLKEKEDMV RLLKEKDDIV DLKKGKVEET QQIVDEEKYR LLKEKDDTIV TLKKEKQEMV RSLKEKEDMV
0401: SLLMAKEDMV DLKKVMVEER QRIIDEGNDR LLKEKDDTIF RFTKEKEEMV RLLKEKEDII RLMKENDDVV RSIQKEDMVN SENGSIKDKK QTTDDGNDRL
0501: ISEKNTIVVR LTEEKEEMIR LLKEKEDTIR LMKEKEDNKA DLKKGTVRNI KQSTDEDTDT STKEKSDIIR LMKENEDYNN TIMKLKLDLE ALKSLHEENC
0601: ELLESKKEDI IKLLADKEDN ASMILQLKQD SLTKENEDIL RLMKEKEDGN SIIAKVKLEM EALRSSYEEA CKLLESKEGD VVRLLADKED NASVILQLRQ
0701: ELEATKRLHE THSQQLETRA SQVKEELEHR IKEVELMLED SIKRKRELEE VSKSRIQFWE QKGIVVNQFV GLQVQNVQDL RLCSVSVRHE ILNCQKRWLE
0801: ELAGLGENLK AVTNAAEKYH AALEENRKLF NEIQELKGNI RVYCRIRPFQ PGEDEGSNSV EYIGDNGELV LTNPTKQKEG GKNFTFNKVF GPTTTQDMVF
0901: KDIQPLIRSV LDGYNVCIFA YGQTGSGKTY TMMGPEKATE KEWGVNYRAL NDLFNISHAR RDMITYELTV QMIEIYNEQI RDLLGGGGAQ KKIGIQNTMQ
1001: PNGIAVPDAT ICPVNSTSQV IDLMQTGHGN RAMSATALNE RSSRSHSVVT IHVRGQDLKT GNTSRGALHL VDLAGSERVD CSAVTGDRLK EAQHINKSLA
1101: ALGDVIFSLS QKNAHVPYRN SKLTQVLQTS LGGHAKTLMF VQVNPDVSSY TETLSTLKFA ERVSGVELGV ARTNKEGKEV KDVRELMDQL SMLKDTISKK
1201: DDEIEQLQLL NTSTSKLKSN RQADHILKHS SSSPGITSLG KVSSVGGGAA SDLDNFSDTS DRQSEAGSML SIEPEVSGLG DVESDGRLSD ASDGGNSTGA
1301: ETDSSVSSVV DQGQEKASST AKERLTKTVS
0001: MSSHLSQDAN MNGVYVRSDV SSMLSFDGSE SRESMDDSKK GHQSLVEWLN ETLPYLKLPW EASEDELRAC LRDGTVLCSL LNQLSPGSMR MGGSFEPASV
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R
0101: KIERFLTAMD EMALPRFEVS DIEQGDMVPV LQSLKALKAS FSDGSYDKNS LAARRRWSLP EDHSDSRGDD RNFTDGFQSK EGSEIDMSDA KISDLLKSNS
0201: LRNAPTRSLF DMLDKLLDES MTKMNGHVSH AMASLLSALV QVIEQRISNQ ADNLKNQNIL FRVREEKYRS RIKVLESLAA GTTKENEIVT NCMEHIKLEK
0301: TRIEEKERSE EKDVVRLRKE KERSDAEIRQ LKQELKLVKE THENQCLELE AKAQKTRDEL EKKLKDAELH VVDSSRKVKE LEKLCQSKSQ RWEKKECIYQ
0401: NFIDNHSGAL QELSATSLSI KHEVVRTQRK YFEDLNYYGL KLKGVADAAK NYHVVLEENR RLYNEVQELK GNIRVYCRIR PFLPGQNSRQ TTIEYIGETG
0501: ELVVANPFKQ GKDTHRLFKF NKVFDQAATQ EEVFLDTRPL IRSILDGYNV CIFAYGQTGS GKTYTMSGPS ITSKEDWGVN YRALNDLFLL TQSRQNTVMY
0601: EVGVQMVEIY NEQVRDILSD GGSSRRLGIW NTALPNGLAV PDASMHCVRS TEDVLELMNI GLMNRTVGAT ALNERSSRSH CVLSVHVRGV DVETDSILRG
0701: SLHLVDLAGS ERVDRSEATG ERLKEAQHIN KSLSALGDVI FALAHKNPHV PYRNSKLTQV LQSSLGGQAK TLMFVQVNPD GDSYAETVST LKFAERVSGV
0801: ELGAAKSSKE GRDVRQLMEQ VSNLKDVIAK KDEELQNFQK VKGNNATSLK RGLSNLRLVG PTSPRRHSIG ASPNARRGKA SGLFGRGTSD VDNCSEYSSK
0901: HSDSGSQQSS DERKHQKDYH QPSKFAGAAK GIDFDDEDVE LVGLADADSE DRLSDISDSC LSMGTETDGS ISSAVELTLF PETAKPLELI ERPEARMTSE
1001: KLEKSVKMGK TEPKDRTNIP SKIPKQTLKP PGQTRPSRLS IATSSSSKAL TGAKRPTIST SSSAKPLNRR R
Arabidopsis Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain [Source:TAIR;Acc:AT1G63640]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.